Couchioplanes caeruleus: COUCH_01540
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Entry
COUCH_01540 CDS
T08133
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COUCH_01540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_01540
Enzymes [BR:
ccaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
COUCH_01540
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
COUCH_01540
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COUCH_01540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
UQU65066
LinkDB
All DBs
Position
complement(332783..333643)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEALAAYLRERAVGHTVERFEVSSFSALKTYDPPPSSVAGQTITNAGRHGKFLD
VSIGVDLHLVVHLARAGWLHYRDSFKSPAPLKPGSGPIALRVRLDDGSGFDLTEAGTQKS
LAAYLVRDPAEVPGVARLGPDALEVDRDQFAERIRGRNGQIKGVLTDQEVLAGIGNAYSD
EILHVAKMSPFALTSKLTDEQITTLYEATRQVETDAVARSVGQKAAELKGEKRAGMRVHA
RTGLPCPVCGDAVREVSFADKSLQYCATCQTGGKPLADRRLSKLIR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagttgcccgaggtcgaggcgctcgccgcgtacctgcgggagcgtgcggtcggc
cataccgtggagcgcttcgaggtgtcctcgttcagcgcgctgaagacgtacgacccgccg
cccagctcggtcgcgggtcagaccatcacgaacgccggccggcacggcaagttcctcgac
gtgtccatcggtgtcgacctgcacctcgtggtgcatctcgcccgggccggctggctgcac
taccgcgactcgttcaagtcgcccgcgccgctcaagccggggagcgggccgatcgcgctg
cgggtacgcctcgacgacggctccggcttcgacctgaccgaggccggcacgcagaagtcg
ctggcggcgtacctggtgcgcgacccggccgaggtgcccggcgtggcccggctcggcccc
gacgcgctggaggtggaccgcgatcagttcgccgagcgcatccgcggccgcaacgggcag
atcaagggcgtgctcaccgatcaggaggtgctcgccggcatcggcaacgcctactcggac
gagatcctgcacgtagcgaagatgtcgccgttcgcgctgaccagcaagctgaccgacgag
cagatcaccaccctgtacgaggcaacccggcaggtggagaccgacgccgtcgcgcggtcg
gtggggcagaaggcggccgagctgaagggcgagaagcgggccggcatgcgggtgcacgcc
cgcaccgggctgccctgcccggtctgcggcgacgcggtgcgcgaggtctcgttcgccgac
aagagcctgcagtactgcgccacctgtcagaccggcggcaagccgctggcggatcgacgc
ctgtccaagctgatccgataa
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