Couchioplanes caeruleus: COUCH_03050
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Entry
COUCH_03050 CDS
T08133
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaz03000
]
COUCH_03050
Transcription factors [BR:
ccaz03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
COUCH_03050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
MarR_2
HTH_20
MarR
HTH_PafC
HTH_24
HTH_AsnC-type
HTH_IclR
HTH_23
HTH_Tnp_ISL3
HTH_Crp_2
Rrf2
GntR
Put_DNA-bind_N
TrmB
HTH_17
Rib_5-P_isom_A
HTH_5
HTH_31
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
UQU65332
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Position
647439..648224
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AA seq
261 aa
AA seq
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MDRYARWNALLELLAESGRVTVEDAADRLDVSQATIRRDFDQLAQQQMITRTRGGAVANG
VSYDLPLRYKSAKHSAEKQRIGEAAANLVVPGTVVGLNGGTTMTEVARALAVRPDLNTRG
DGAQLTVVTNALNIANELLVRSRMKIVVAGGVVRPQSFELVGPLGGALLKEVTLDIVLLG
VDALDVELGAAAHHEGEAAMNSLMVARAKRVVVIADSSKLGGHAFARICPIAKVETLVTD
SGAPAPVVQAFREAGVHVVVA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtggaccggtacgcgcggtggaatgccctgctggagttactggcggagagcggccgcgtc
acggtggaggacgcggcggaccgcctcgacgtctcccaggccacgatccgccgcgacttc
gaccagctcgcccagcagcagatgatcacccggacccggggcggggcggtcgccaacggg
gtctcgtacgacctgccgctgcgctacaagagcgccaagcactccgccgagaagcagcgc
atcggcgaggcggccgccaacctggtcgtacccggaaccgtcgtcggcctcaacggcggc
accacgatgaccgaggtcgcccgcgcgctggccgtccgccccgacctcaacacccgcggc
gacggcgcccagctcacggtcgtcacgaacgccctcaacatcgccaacgagctgctcgtc
cgctcccgcatgaagatcgtggtcgccggcggcgtggtccggccgcagtccttcgagctg
gtcggaccgctcggcggggcgctgctcaaggaggtcacgctcgacatcgtgctgctcggc
gtggacgccctcgacgtggagctcggcgcggccgcccaccacgagggcgaggcggcgatg
aacagcctgatggtggcccgggccaagcgcgtcgtggtgatcgccgactcgtcgaagctg
ggcggccacgcgttcgcccggatctgcccgatcgccaaggtcgagaccctggtcacggac
tcgggcgcgccggccccggtggttcaggccttccgcgaggccggcgtgcacgtcgtcgtc
gcctag
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