KEGG   Couchioplanes caeruleus: COUCH_07960
Entry
COUCH_07960       CDS       T08133                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ccaz  Couchioplanes caeruleus
Pathway
ccaz03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ccaz00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    COUCH_07960 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaz03019]
    COUCH_07960 (rnc)
   03009 Ribosome biogenesis [BR:ccaz03009]
    COUCH_07960 (rnc)
   03036 Chromosome and associated proteins [BR:ccaz03036]
    COUCH_07960 (rnc)
Enzymes [BR:ccaz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     COUCH_07960 (rnc)
Messenger RNA biogenesis [BR:ccaz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     COUCH_07960 (rnc)
Ribosome biogenesis [BR:ccaz03009]
 Eukaryotic type
  90S particles
   RNase
    COUCH_07960 (rnc)
 Prokaryotic type
  rRNA processing factors
   COUCH_07960 (rnc)
Chromosome and associated proteins [BR:ccaz03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     COUCH_07960 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: UQU66207
LinkDB
Position
1673851..1674777
AA seq 308 aa
MSSNDRRRVRPSTEPLEEAFGVPLEPELLERALTHRSYAYENGGLPTNERLEFLGDSVLG
VVITSALFHNHPDLPEGQLAKLRASVVNMHALADVARTLGPGGLGPHLLLGKGEETTGGR
DKASILADTLEALLGAIYLEHGLDTAGEVIHRLFDPLMAESAGRGAALDWKTSLQELTAA
LGLGVPDYVIDDAGPDHAKTFTAWVVVAGERYGGSDGRSKKQAEQRAAAAAWRTLTERAE
EKTPPPAVAGGGHADLEQADAKNAAAAADAKNAGAADANNAVASGASNAASDASNAAGQA
DDRSAAGR
NT seq 927 nt   +upstreamnt  +downstreamnt
atgagcagtaacgacaggcgtcgggtgcggccctccacggagccgctcgaggaggccttc
ggcgtcccgctggagccggagctgctcgagcgggcgctgacccaccgctcgtacgcctac
gagaacggcggcctgcccaccaacgagcggctcgagttcctcggcgactcggtgctgggc
gtggtgatcacctcggcgctgttccacaaccacccggacctgcccgaggggcagctcgcc
aagctgcgcgccagcgtggtgaacatgcacgcgctcgccgacgtggcccgcacgctgggc
ccgggcggcctcggcccgcatctgctgctgggcaagggtgaggagaccaccggcggccgg
gacaaggcgagcatcctggccgacacgctggaggcgctgctcggtgccatctacctggaa
cacggcctggacaccgccggcgaggtgatccaccggctgttcgacccgctgatggccgag
tcggccgggcgcggcgcggcgctggactggaagacgagcctgcaggagctgaccgcggcg
ctggggctgggagttcccgactacgtcatcgacgacgcgggcccggaccacgccaagacg
ttcaccgcctgggtcgtcgtggccggcgagcgctacggcggttccgacgggcgcagcaag
aagcaggcggagcagcgcgcggccgcggcggcctggcgcacgctgaccgagcgcgccgag
gagaagacgccgcccccggccgtggcgggcggcggccacgccgacctcgaacaagcggac
gcgaagaacgccgccgccgcagccgacgcgaagaacgccggcgcagccgacgcgaacaac
gccgtggcctcaggcgcgagcaacgccgcgtcggacgcgagcaacgccgccgggcaggcc
gacgacagaagcgccgccggccggtga

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