Couchioplanes caeruleus: COUCH_08510
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Entry
COUCH_08510 CDS
T08133
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaz03016
]
COUCH_08510 (truB)
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
COUCH_08510 (truB)
Transfer RNA biogenesis [BR:
ccaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COUCH_08510 (truB)
Prokaryotic type
COUCH_08510 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UQU68449
LinkDB
All DBs
Position
1793140..1793979
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AA seq
279 aa
AA seq
DB search
MTSHDVVARIRRLAKTRRVGHGGTLDPMATGVLVIGVNRATRLLTYVIGSRKSYLATIRL
GQSTVTDDAEGDVTATISAAEVTEEAVRAGLAAQVGEIDQVPSAVSAIKVNGQRAYKRVR
DGEEVELAARRITIHSLDVLDVRHSGDVVDVDVDVTCSSGTYIRAIARDLGRGLGVGGHL
TALRRTAVGAMTLAEASTLEQLEQRAPDVVSLSLAEAAGRAFPRRDATVDEVRVLSHGGP
LEPVGIEGPYAVFDPAGEVLAVVSERGGRARAEIVLAPA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccacgacgtcgtggcgcggatccggcggctggccaagacccgcagggtgggg
cacggcggcacgctggacccgatggccaccggcgttctcgtcatcggcgtcaaccgggct
acccggctgctgacgtacgtgatcggctcccgcaagagctacctcgcgacgatccggctg
ggccagtcgaccgtcaccgacgacgccgagggtgacgtgaccgccacgatctcggcggcg
gaggtcaccgaggaggcggtacgggccgggctggcggctcaggtcggcgagatcgaccag
gtgcccagcgcggtcagcgcgatcaaggtgaacgggcagcgggcgtacaagcgggtccgc
gacggcgaggaggtcgagctcgccgcgcgccggatcacgatccacagcctcgacgtgctg
gacgtgcggcactccggtgacgtggtcgacgtcgacgtggacgtcacctgctcgagcggt
acgtacatccgggcgatcgcccgggacctgggccgggggctgggcgtcgggggccacctc
accgcgctgcggcgtacggcggtgggcgcgatgacgctggccgaggcgtcgacgctggag
cagctcgagcagcgggcgccggacgtcgtgtcgctgtccctggccgaggccgccgggcgg
gcgttcccgcgccgcgacgccacggtggacgaggtgcgggtgctcagccacggcggcccg
ctggagccggtcggcatcgagggcccgtacgccgtcttcgacccggcgggcgaggtcctg
gccgtcgtctccgagcgcggcggcagggcccgcgccgagatcgtgctggccccggcctag
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