KEGG   Couchioplanes caeruleus: COUCH_08655
Entry
COUCH_08655       CDS       T08133                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ccaz  Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:ccaz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccaz03400]
    COUCH_08655
Enzymes [BR:ccaz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     COUCH_08655
    5.6.2.6  RNA 3'-5' helicase
     COUCH_08655
DNA repair and recombination proteins [BR:ccaz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    COUCH_08655
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr WHD_3rd_Lhr DEAD Helicase_C ResIII AAA_25
Other DBs
NCBI-ProteinID: UQU66325
LinkDB
Position
complement(1824958..1829523)
AA seq 1521 aa
MGTVRDVLEQFGLPTREWFKAAFAAPTAAQAGAWRAIGAGRNALVVAPTGSGKTLAAFLW
SLDRLAHETVPEDPKHRCRVLYVSPLKALAVDVERNLRAPLTGIRQASGRLGVPPPDITV
GMRTGDTPADERRSFARTPPDILITTPESLFLLLTSAARESLRGVETVIIDEVHAVAATK
RGAHLALSLERLDALLERPAQRIGLSATVRPIEDTARFLGGAHDVEIVQPGSAKTIEVSV
EVPVEDMTRLDEVPDVDADDPGAGRHSPSIWPAVEERVLDLIQAHRSTIVFTNSRRGAER
LCARINELALGRAGGEPAPAPATRPPAQVMAQSGEAGGAPPVVARAHHGSVSREERKQIE
EALKSGQLPAVVATSSLELGIDMGAVDLVVQIEAPPSVSAGLQRIGRAGHQVGAISRGVV
FPKHRGDLVSCAVVAERMGEGAIEELRYLRNPLDVLAQQIVAMVALDEWHLDDLATLVRR
SAPYAELPDSALHAVLDMLSGRYPSTAFAELRPRLVWDRTTDQLTGRPGAQRLAVTSGGT
IPDRGMFGVFLAGSERASRVGELDEEMVYESRVGDVFLLGSTSWRIEDITPDRVLVSPAP
GAPARMPFWKGDALGRPIELGRAIGARLRGLTRAGDETAVASLRESGLDEWAANNLIAYL
REQRESTRNLPDDRTVVVERFRDELGDWRMTVHCVLGARVNAPWALAIARRLGERYGVDG
QVMPSDDGIVVRLPDTAEEPPGADLVAFDPEEIAQIVEESVGTSALFASRFRECAARSLL
LPRRDPRRRQPLWQQRQRSAQLLDVAREFADFPVTLEAARECLQDVFDVPGLVGLMREIG
GRKVRLVEAETPRPSPFARSLLFGYVGAFLYEGDAPLAERRAAALALDSTLLGELLGRVD
LRELLDPTVVTESESQLQWLTTQRTPRDAEDAAELLRLLGDLSPADLTARSVDLDWMEQL
AGSRRAIRVRIAGEERWIGVEDAGRYRDALGVALPVGVPEAYLEPVADPLGDLVARYART
HGPFAAATCAARFGLGVFVVEQALKRLSATGRVVSGEFSPGGAGTEWCDAEVLRLLRRRS
LAALRREIEPVPPRVLAAFLPRWHQIGGNARGIDALAASIEQLQGLAVPASAWERLVLPA
RVADYAPPQLDELCAGGEVLWAGSGSISGGDGWVTLAYADSAPLLLTPPDDELALTPLHQ
AVLDALGDGQALFFRTLSDKVHSTDDTGLAAAVWDLVWAGHLTNDTFAPLRALLGGSGAH
RAKAAPARTRYRRPGRPGRPVMPSRGGPPAMAGRWSRLPDRDLDPTRRAAAQADLLLERH
GVVTRGAVMAEGVPGGFAAVYPVLGALEERGAARRGYFVEGLGAAQFAVPGAVDRLRALA
EPAELAKRTGATAVVLAATDPANPYGAALPWPDRIVDSGNGEPTPATGHRAGRKAGALVV
LVGGDLTLYVERGGRTLLSYTDDPEALIAAGQALAGSVKSGALGPMSVERADGESVHSSP
LRDALTAAGFRATPRGLRLRG
NT seq 4566 nt   +upstreamnt  +downstreamnt
atggggactgtgcgagacgtgctggagcagttcggcctgccgacccgggagtggttcaag
gccgccttcgccgcgcccaccgccgcccaggccggggcgtggcgggcgatcggcgccggg
cgcaacgcgctggtcgtggcgccgaccggctccggcaagacgctcgcggcgttcctctgg
tcgctggaccggctggcccacgagacggtgcccgaggacccgaaacaccgctgccgcgtg
ctctacgtcagcccgctcaaggccctggcggtcgacgtcgagcgcaacctgcgcgccccg
ctgacgggaatccgacaggcgtccgggcgcctgggcgtgccgccgcccgacatcacggtc
ggcatgcgcaccggtgacacccccgccgatgagcggcgcagcttcgcgcggacaccgccg
gacatcctcatcaccacgccggagtcgctgttcctgctgctcacctcggccgcgcgggag
tcgctgcgcggcgtcgagacggtgatcatcgacgaggtgcacgcggtcgcggccaccaaa
cgcggcgcccacctggcgctgtccctcgagcggctcgacgcgctgctggagcgtcccgcc
cagcgcatcggcctgtcggcgaccgtgcggcccatcgaggacaccgcccggttcctgggc
ggcgcgcacgacgtcgagatcgtgcagcccggcagcgcgaagaccatcgaggtctccgtc
gaggtcccggtcgaggacatgacccgcctggacgaggtgcccgacgtcgacgccgacgac
ccgggcgccggccggcactccccctccatctggcctgccgtcgaggagcgggtgctcgac
ctcatccaggcgcaccgctcgaccatcgtgttcaccaattcccggcgcggcgccgaacgg
ctctgcgcgcgcatcaacgagctggcgctggggcgcgccggcggtgagccggcccccgcc
ccggccacgcgtccgccggcccaggtcatggcccagtccggcgaggccggcggcgcgccg
cccgtggtcgcgcgggctcaccacggcagcgtctcgcgcgaggagcgcaagcagatcgag
gaggcgctgaagtccggccagctgcccgcggtcgtcgccacgtccagcctcgagctcggc
atcgacatgggcgcggtcgacctcgtggtgcagatcgaggccccgccgtcggtctcggcc
ggcctgcagcgcatcggccgcgccgggcaccaggtcggcgccatctcccgcggcgtggtc
ttcccgaagcaccgcggcgacctcgtctcctgtgccgtcgtggcggagcgcatgggcgag
ggcgccatcgaggagctgcgctacctgcgcaacccgctggacgtgctcgcccagcagatc
gtcgcgatggtcgccctcgacgagtggcacctcgacgacctcgccacgctcgtgcgccgg
tccgcgccctatgcggagctgcccgactccgcgctgcacgccgtgctggacatgctctcc
ggccgctacccgtcgaccgccttcgccgagctgcgtccccgcctggtctgggaccgcacc
accgaccagctcaccggccgccccggcgcccagcgcctcgccgtcaccagcggcggcacg
atccccgaccgcggcatgttcggcgtcttcctcgccggctcggagcgggcctcccgcgtc
ggcgagctcgacgaggagatggtgtacgagtcccgcgtcggggatgtcttcctgctcggc
tccacctcgtggcgcatcgaggacatcacccccgaccgggtgctggtctcccccgcgccc
ggcgcccctgcccgcatgccgttctggaagggcgacgcgctcggccgcccgatcgagctg
ggccgggccatcggcgcccggctgcgcggcctgacccgcgccggcgacgagaccgccgtc
gcctcgctgcgcgagtcgggactggacgaatgggccgcgaacaacctcatcgcctatctg
cgcgagcagcgcgagtcgacccgcaacctgcccgacgaccgtacggtcgtggtcgagcgc
ttccgcgacgagctgggcgactggcggatgaccgtgcactgcgtactgggcgcccgggtc
aacgcgccctgggcgctggccatcgcccgccggctcggcgagcggtacggcgtggacggc
caggtcatgccctccgacgacggcatcgtggtgcgcctgccggacaccgccgaggagccg
cccggcgccgacctggtcgcgttcgaccccgaggagatcgcgcagatcgtcgaggagtcg
gtcggcacgtcggcgctgttcgcctcccgcttccgcgagtgcgccgcccgctccctcctg
ctgccccgccgcgatccccgccgccggcagccgctgtggcagcagcgccagcgctcggcc
cagctgctcgacgtggcccgcgagttcgccgacttcccggtgacgctcgaggccgcgcgc
gaatgcctgcaggacgtcttcgacgtgcccggcctggtcggcctcatgcgcgagatcggc
gggcgcaaggtccggctcgtcgaggccgagacgccgcggccctccccgttcgcccgctcg
ctgctcttcgggtacgtgggcgccttcctgtacgagggcgacgcgcccctggccgaacgc
cgcgccgccgccctcgcgctggactccacgctgctcggcgagctgctgggccgcgtcgac
ctgcgcgagctgctcgaccccacggtggtcaccgagagcgagagccagctgcagtggctc
accacgcaacgcaccccgcgcgacgccgaggacgccgccgagctgctccggctcctcggg
gacctgtcgccggccgacctcaccgcccggtcggtggatctggactggatggagcagctg
gccggttcgcggcgggccatccgcgtccgcatcgccggcgaggaacgctggatcggtgtc
gaagacgcgggccgctaccgcgacgcgctcggcgtggccctgcccgtcggcgtgcccgag
gcctacctggagccggtggccgacccgctcggcgacctcgtcgcccggtacgcccgcacc
cacggcccgttcgccgcggcgacctgtgcggcccgcttcggcctcggcgtcttcgtcgtc
gagcaggccctcaagcggctcagcgccaccggccgcgtcgtctccggcgagttctccccg
ggcggcgccggcaccgaatggtgcgacgccgaggtgctgcgcctgctgcgccgccggtcg
ctcgccgccctgcgccgcgagatcgagccggtgccgccgcgcgtgctggcggcgttcctg
ccccggtggcaccagatcggcggcaacgcccgtggcatcgacgcgctcgccgcctcgatc
gagcagctccagggcctcgcggtcccggcgtcggcgtgggaacgcctcgtcctgcccgcc
cgcgtcgccgactacgcgccgccccagctcgacgagctctgtgcgggcggcgaggtgctc
tgggccggctccggcagcatctccggcggcgacggctgggtcaccctcgcctacgccgac
agcgccccgctgctgctcacgccgcccgacgacgagctggcgctcaccccgctgcaccag
gcggtgctggacgcgctcggcgacgggcaggcgctgttcttccgtacgctctccgacaag
gtccactccaccgacgacaccgggctcgccgcggccgtgtgggacctcgtctgggccggc
cacctcaccaacgacacgttcgccccgctgcgggccctgctcggcggcagcggcgcccac
cgcgccaaggccgcccccgcccgcacccggtaccgccgcccgggccgccccggccgcccg
gtcatgccgtcccgcggtgggcccccggcgatggccggccgctggtcccgcctgcccgac
cgcgacctcgacccgacccgccgcgccgcggcccaggccgacctcctgctcgaacgccac
ggcgtcgtcacccgcggagccgtcatggccgagggcgtccccggcggcttcgcggcggtc
taccccgtactcggcgcgctcgaggaacgcggagcggcccgccgcggctacttcgtcgag
ggcctcggcgccgcccagttcgccgtccccggagccgtcgaccgcctccgagccctcgcc
gaaccggccgagctcgccaaacgcaccggcgccaccgccgtcgtcctcgcggccaccgac
ccggccaacccgtacggcgcggccctgccctggcccgaccgcatcgtcgacagcggcaac
ggcgaacccacccccgccaccggccaccgggcgggccgcaaagccggcgccctggtcgtc
ctcgtcggcggcgacctcaccctgtacgtcgaacgcggcggccgcaccctcctgtcgtac
accgacgacccggaagccctgatcgcggcgggccaggcgctcgcgggctcggtgaagtcg
ggagcactgggaccgatgtcggtggaacgggcggacggggaatcggtgcactcgtcgcca
ctgcgggacgcattgacggcggcgggcttccgcgccacgccgcgcgggttgaggctgcgc
ggctga

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