Couchioplanes caeruleus: COUCH_12175
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Entry
COUCH_12175 CDS
T08133
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaz03032
]
COUCH_12175
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_12175
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
COUCH_12175
DNA replication proteins [BR:
ccaz03032
]
Prokaryotic type
DNA Topoisomerases
COUCH_12175
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
COUCH_12175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UQU66978
LinkDB
All DBs
Position
2596859..2598916
Genome browser
AA seq
685 aa
AA seq
DB search
MTAQQEILYGADDLTHLEGLDAVRKRPGMYIGSTDSRGVNHLANEIIDNSTDEGVAGHAD
NVTVFLHADGSVQVDDDGRGIPTDINAKSGLSGVELVLTRLHAGGKFGGSGYKTSGGLHG
VGASAVNALSLRFDVTVKRDGKVHEMSFQRGVPGVFSGDGPSAKFQPEPGLRVVRKMKRG
ERSGTSIRYWYDARYFETGARLDTDTVRAKLRNTAFLVPGVAFVLHDRTGEEPLEETFHY
PHGLTDMVEFLTPSGDKPVSGILMVTGEGTYKENAADANGVMQSNVERRAEIEVAFRWGT
GYERTVECFTNTIRNVHGGTHRKGFERALTRALGEAVRNARGLLKPKEDVPVLDDYLEGL
TAVIHVRVPEPQFTSQTKDELSTAGITRVLQGLVEQHLKQWIDDRRTKSEARTVLQKVVD
AARVRLTQKQQKDAARRKTALEGASMPPKLVDCRSTGISRSELYIVEGDSALGTARMARS
SEYQALLPIRGKILNVQKASLQQVLDNAECSAIVQVLGAGSGRTFDLSTMRYGRVMIMAD
ADVDGSHIRTLLITLFAKYMRPVIENGRLFAAMPPLHKVSTKGRNSETVYTYTQQEMETT
VARFEKAGRSVNRPVPRFKGLGEMDADELWDTTMNPATRAVRRITLTDAERAEATLELLM
GERVEPRKNWLIEAAGRIDQETIDA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcgcaacaggagatcctctacggggccgacgatctcacgcacctcgagggcctc
gacgcggtgcgcaagcgccccggcatgtacatcggctcgaccgacagccgcggtgtcaac
cacctcgccaacgagatcatcgacaactccaccgacgagggcgtcgccggccacgccgac
aacgtcacggtcttcctgcacgccgacggctcggtgcaggtcgacgacgacggccgtggc
atccccaccgacatcaacgccaagtccggcctctccggcgtcgagctcgtgctcacccgg
ctgcacgcgggcggcaagttcggcggctccggctacaagacctccggcggcctgcacggc
gtcggcgcctccgcggtcaacgcgctgtcactgcgcttcgacgtgaccgtcaagcgcgac
ggcaaggtccacgagatgtcgttccagcgtggcgtcccgggcgtcttctccggcgacggc
ccgtcggcgaagttccagcccgagcccggcctgcgcgtcgtgcgcaagatgaagcgcggc
gagcggtccggcacgtcgatccgctactggtacgacgcccgctacttcgagaccggcgcc
cggctcgacaccgacaccgtccgcgccaagctgcgcaacaccgcgttcctcgtgcccggc
gtcgcgttcgtgctgcacgaccgcaccggcgaggagccgctcgaggagaccttccactac
ccgcacgggctcaccgacatggtggagttcctgaccccgtccggcgacaagccggtctcc
ggcatcctgatggtcaccggcgagggcacctacaaggagaacgccgccgacgcgaacggc
gtcatgcagtccaacgtcgagcgccgcgccgagatcgaggtcgcgttccgctggggcacc
ggctacgaacgcaccgtcgagtgcttcaccaacacgatccgcaacgtgcacggcggcacc
caccgcaagggcttcgagcgggccctgacccgcgccctcggcgaggccgtccgcaacgcc
cgcgggctgctcaagcccaaggaggacgtgccggtcctcgacgactatctcgagggcctc
accgcggtcatccacgtgcgcgtgccggagccgcagttcacctcgcagaccaaggacgag
ctctccaccgccggcatcacccgggtcctgcagggcctggtcgagcagcacctcaagcag
tggatcgacgaccggcggaccaagagcgaggcccgcacggtgctgcagaaggtggtcgac
gccgcccgcgtgcgcctcacccagaagcagcagaaggacgccgcgcggcgcaagaccgcc
ctcgagggcgcgtccatgccgcccaagctcgtcgactgccgctcgaccggcatcagccgc
agcgagctctacatcgtggagggtgacagcgcgctgggcaccgcccggatggcccgcagc
tcggagtaccaggcgctgctgcccatccgcggcaagatcctgaacgtgcagaaggccagc
ctgcagcaggtgctcgacaacgccgagtgctcggccatcgtgcaggtgctcggtgccggc
tcgggccgcacgttcgacctgagcacgatgcgctacggccgggtcatgatcatggcggac
gcggacgtcgacggctcgcacatccgcaccctgctgatcaccctgttcgccaagtacatg
cggccggtgatcgagaacggccggctcttcgccgccatgccgccgctgcacaaggtcagc
accaagggccgcaactccgagacggtgtacacgtacacccagcaggagatggagaccacg
gtcgcccggttcgagaaggccggcaggtccgtcaaccggccggtgccccggttcaagggc
ctcggcgagatggacgccgacgagctgtgggacaccacgatgaaccccgccacccgcgcg
gtccggcggatcaccctgaccgacgccgagcgggccgaggccaccctcgagctgctcatg
ggtgagcgggtcgagccccgcaagaactggctcatcgaggccgccggccgcatcgaccag
gaaacgatcgacgcctga
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