Couchioplanes caeruleus: COUCH_12180
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Entry
COUCH_12180 CDS
T08133
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaz03032
]
COUCH_12180
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_12180
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
COUCH_12180
DNA replication proteins [BR:
ccaz03032
]
Prokaryotic type
DNA Topoisomerases
COUCH_12180
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
COUCH_12180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
UQU66979
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Position
2598934..2601456
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AA seq
840 aa
AA seq
DB search
MARRKNEQSRVDLSAFDQAGARVIDNPITTEVEDSYLEYAYSVIHSRALPDARDGLKPVH
RRILWSMAEQGHRPDRGYVKSARVVGDVMGKYHPHGDVAIYDALVRLAQDFSLNVPLIDG
HGNFGSPDDGPAAARYTEARMSQEAMLLVRELGEGTVDFKPTYDGDAEEPKVLPAAFPNL
LVNGTSGIAVGMATNMIPHNLGEVVAAARHLITTPEADLDELMRFVPGPDLPTGGQLLGL
DEVRRAYETGRGVVRMRARAQTGPLEGGRGRQAITVVELPYGVGTEKIIEAITDEVKGKL
IVSGPKKGQRQAARLQGIADVKDLTDREHGIRLVIECKVGVNPQALLADLYRLTPLETSF
GINNLVLVDGQPRTLGLKELLEVFLAHRYEVVTRRTTHRRTKRQDRLHLVDGLLIALIDI
DRVVAIIRGSDDAAAAKAGLMSEFGLTDIQATYILDTPLRRLTRFDRIELETEQQRLNEE
IAELSRILDDENVLKQVVSDELAEVAAEFATPRRTTLIDGDLKEVLAASAPAGPLEVADD
PCQVILSATGLIARTAAESEEATEARRRSGRVKHDAVRAVVHSTARGRVLLITNRGRAFK
TDVLPLPVLPEQSGTVSLRGGMSASELIPLEKGERVVGLAPLTAGDSPGLALGTRRGVVK
VCAPEWPVRSDEFEVITLKDGDEVLQATWLTDGAEGLVFVTSDASLLRFPAKLVRPQGLK
GGGMAGVNLTAGAEALSFNAVSTHDPQHGEPMVVTSTGTQVKVTPFTAYPAKGRATGGVR
VQRFLKGESRLTVAWVGPRPVGASTTGDPVDLPDPDGRRDGSGEAVLMGPQIVGHLIERG
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcaagaacgagcagtcccgggtggacctgtcggccttcgaccaggccggg
gcccgcgtcatcgacaaccccatcaccaccgaggtcgaggactcctacctggagtacgcg
tactcggtcatccactcccgcgccctcccggacgcccgcgacggcctcaagcccgtccac
cgccgcatcctgtggtcgatggcggagcagggccaccgccccgaccgcggctacgtcaag
agcgcccgcgtcgtcggggatgtgatgggcaagtaccacccgcacggcgacgtggcgatc
tacgacgcgctggtccgcctcgcccaggacttctccctcaacgtcccgctgatcgacggc
cacggcaacttcggctcgcccgacgacggccccgccgccgcccggtacaccgaggcccgg
atgtcgcaggaggcgatgctgctcgtccgggagctgggcgagggcacggtcgacttcaag
cccacgtacgacggcgacgccgaagagccgaaggtgctgcccgcggccttccccaacctg
ctggtcaacggcacgtcgggcatcgcggtcgggatggcgaccaacatgatcccgcacaac
ctcggcgaggtcgtggcggcggcccggcacctgatcaccacccccgaggcggacctggac
gagctgatgcggttcgtgcccggcccggacctgcccaccggcgggcagctgctcggcctc
gacgaggtgcgccgggcgtacgagacgggccgcggcgtggtccggatgcgggcccgcgcc
cagaccgggccgctggagggcggccgcggccggcaggccatcacggtggtcgagctgccg
tacggcgtcggcaccgagaagatcatcgaggcgatcaccgacgaggtgaagggcaagctc
atcgtctccggcccgaagaagggccagcgccaggccgcccgcctgcagggcatcgcggac
gtcaaggacctcaccgaccgcgagcacggcatccggctcgtcatcgagtgcaaggtcggc
gtcaacccgcaggcgctgctcgccgacctgtacaggctgacgccgctggagacctccttc
ggcatcaacaacctcgtgctggtcgacggtcagccgcgcaccctcgggctcaaggagctg
ctcgaggtgttcctggcgcaccgctacgaggtggtcacccggcgcaccacgcaccggcgt
acgaagcggcaggaccggctgcacctcgtcgacggcctgctcatcgccctcatcgacatc
gaccgggtcgtcgcgatcatccgcggcagcgacgacgccgcggccgcgaaggccggcctg
atgagcgagttcgggctgaccgacatccaggcgacgtacatcctggacaccccgctgcgg
cggctgacccgcttcgaccgcatcgagctggagaccgagcagcagcggctcaacgaggag
atcgccgagctgtcccgcatcctcgacgacgagaacgtgctcaagcaggtcgtctccgac
gagctggccgaggtcgcggcggagttcgccacgccccggcgcaccacgctcatcgacggc
gacctcaaggaggtgctggccgcgtccgcgccggccgggccgctggaggtcgcggacgac
ccgtgccaggtgatcctgtcggccaccgggctcatcgcccgtacggcggccgagagcgag
gaggcgacggaggcccgccgccgcagcggccgggtcaagcacgacgcggtccgcgcggtc
gtgcactccaccgcccgcggccgggtgctgctgatcaccaacaggggccgggcgttcaag
accgacgtgctgccgctgccggtgctcccggagcagtccggcacggtgtcgctgcgcggt
ggcatgtccgcctccgagctgatcccgctcgagaagggcgaacgcgtcgtcggcctggcc
ccgctcaccgccggcgactccccgggtctggccctgggcacccgccgcggcgtggtcaag
gtctgcgcgccggaatggccggtccgctccgacgagttcgaggtcatcaccctcaaggac
ggcgacgaggtgctccaggccacctggctcaccgacggcgccgagggcctcgtcttcgtc
acctcggacgcgtccctcctgcgcttcccggcgaaactcgtccgcccgcagggcctcaag
ggcggcggcatggcgggcgtcaacctgaccgcgggcgccgaggccctctcgttcaacgcg
gtcagcacccacgacccccagcacggcgaacccatggtcgtcacctccacgggcacccag
gtgaaggtcaccccgttcacggcgtacccggccaagggccgagccacgggcggcgtccgc
gtccaacgcttcctcaagggcgaatcccgcctcacggtcgcctgggtcggcccccgcccg
gtcggcgccagcaccacgggcgacccggtcgacctcccggacccggacggccgccgcgac
ggctcgggcgaagcggtcctgatgggcccacagatcgtcggccacctgatcgaacgcggc
tga
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