Couchioplanes caeruleus: COUCH_15275
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Entry
COUCH_15275 CDS
T08133
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz03420
Nucleotide excision repair
ccaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
COUCH_15275
03430 Mismatch repair
COUCH_15275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_15275
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COUCH_15275
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
COUCH_15275
MMR (mismatch excision repair)
Other MMR factors
COUCH_15275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
UQU67543
LinkDB
All DBs
Position
3263892..3266636
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AA seq
914 aa
AA seq
DB search
MSSPNAIPQLTGMALAAVQHRGSHLQIIASAGSGKTEVVSQRVVDLLADGVDPEGIVAFT
FTERAAEELKTRIVQRVEGRLGRGVVDRLNGLFVGTIHAFCFRLLQQRVPRFETYDVLDD
NQLTAFMAREANRLNIRALDAGNRLFASIEAFGKGVDVVENELLDPASISEPLGPVLRDY
YATLERYRLLTYGQQVVRAVRELERPEFAAEVHATLRHLIVDEYQDVNPAQERLIELLTG
PQVELCVVGDDQQAIYQWRGSDVANIVTFAERYPNVATFEITVNRRSRPQIIATANRFAQ
TIPDRIDKEMLPYRESGTIPQSEVAVWCGSDEEEEAGWITSYILDLVERGLRYRDIAVLV
RSRAAYGRLVEQLATFGVPVQPGGRSGLFEMPEARVLGRVFAWLTDTDWRDYRQAPQPVT
DAAIFGELIQVFELDAVRRAAVVRLLREWKTFVPRETRTANLVGELYELFAELGVRHWDL
NEPGVINRLGTLARVSALLADYESVRRRARPDAAAPGEQVGGQDRGTWYYRNLALHTINY
AQNAYEGFDGEGDFTLDAIDLTTVHRAKGLEWPVVFVPSMTKGRFPSSRTGKPQEWLVPR
TKFDAARYEGSDADERRLFYVAMTRARDWLSVSRHERVTTRRVARSPYHQEICPVEVKPD
DVGFPSIERRGADSDEAITLTYSQMAAFMDCGQAFRLREMIGFQPRLAPELGYGKAVHHV
LRSVAESTKETGKVRSPAEIDALLDASFFLPTANKAAHRQLKDAARRLVGTYTDKYASDL
HRVWETERPFELHLDGVIVTGRADVILDREGGVTEALAIVDYKTSTSGDHEQHALQLQVY
ADAGRREGLDVRAAYVHDLKHATRMPIEVDAEAIARAEATVTEAAERVKARDYRPNPGAR
CRGCEVRTICGSAR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcccaacgcaatcccacagctcaccggcatggcgctcgccgccgttcaacac
cgtgggagtcacctgcagatcatcgcttcggccgggtcaggcaagaccgaggtggtctcc
cagcgcgttgttgatctgcttgcggacggtgtcgatcccgagggcatcgtggcgttcacc
ttcaccgagcgcgcggccgaggagctgaagactcgcatcgttcagcgagtcgagggccgg
ctcggtcgaggagtagtcgatcgactcaacggcttgttcgtaggcacgatccacgccttc
tgctttcgcctgctccagcagcgagtaccccgcttcgagacctatgacgtgctggacgac
aaccagctcacggccttcatggcccgcgaggcgaaccggctcaatatccgggcgctggac
gcgggcaaccggctctttgcctcgatcgaggcgttcggcaagggcgttgacgtcgttgag
aacgaactgctcgacccggcatctatatctgaaccccttgggccggtactgcgcgactac
tacgcgaccctcgaacggtaccgacttctgacctatggccagcaggttgtccgagctgtg
cgggaactcgaacggccggaattcgcggccgaggtccacgctacgcttcgtcacctgatt
gtggatgagtatcaggacgtcaaccctgcccaggagcggctcatcgagcttctcactggc
cctcaggtcgaactgtgcgtggtcggagatgaccagcaggcgatctatcagtggcgaggt
tcggacgtggcgaacatcgtgacgttcgcagagcgctatccgaacgtggcgactttcgag
attacggtgaaccggcgcagccggccccagatcatcgccacggccaatcggttcgcgcag
acgatcccggaccgcatcgacaaggagatgcttccgtatcgcgaatccgggaccattccg
caatccgaagtggccgtctggtgtggctccgatgaggaagaggaagccggctggataacg
tcatacatcctcgacctggtcgagcggggactgcggtaccgcgatatcgccgtgctcgtg
cgcagtcgggccgcctatggccgcctggtcgagcaactcgcgacgttcggcgttcccgtg
caacccggtgggcgatctggtctgttcgagatgccggaagcgcgcgtgctgggccgcgtg
ttcgcctggctgaccgacactgattggcgggactaccgccaggcaccgcaaccagtcacc
gacgcggcaatctttggcgagctgatccaggtctttgagctggacgccgtacgacgcgct
gccgtcgttcgcttgctgcgcgagtggaagacgtttgtacccagagagacgcgaaccgcc
aacctggtgggggaactctacgagctgttcgcagagttgggcgtacgccattgggatttg
aacgagcccggggtgattaaccggctcggtacgttggctcgggtctctgcattgctcgcc
gactacgagtcggtgcgccggcgagcccggccagatgcggccgctcctggcgaacaggtg
ggcggacaggaccgtggcacctggtactaccggaacctggcgctgcacaccatcaactac
gcccagaacgcgtatgaggggttcgatggtgagggagacttcacgctcgatgccatcgat
ctgacgacggtgcatcgggcgaagggtctcgagtggccagtcgtcttcgtgccgtcgatg
accaaggggcgcttcccctcttcacgcaccggtaagccgcaagagtggctcgtaccccgg
acgaagtttgacgcagcccgatacgaaggatcggacgccgacgagcgacggctcttctat
gttgctatgactcgagcccgcgactggctttctgtctcccggcacgagcgcgtaacgacg
cggcgagttgcgcgaagcccgtatcaccaggagatctgtcctgttgaggtcaagccggac
gatgtcggctttccgtcgatcgagcgaaggggagccgatagcgacgaggccatcaccctg
acgtacagccagatggcggcgttcatggattgtgggcaggcattccggctgcgcgagatg
atcggcttccagccgcggctggcgcccgagctcggttacggcaaggccgtgcaccacgtt
ttgcggtcggtggccgagtcgacgaaggagaccggaaaggttcggtcgcccgcagagatc
gatgcgcttctcgacgccagctttttcttgcccaccgctaacaaggctgcacaccggcag
ctgaaagacgcggctcgacggcttgtcggcacctacaccgacaagtatgcgagcgatctg
caccgcgtgtgggagacggaacggccgttcgagctgcaccttgacggcgtgatcgtaacc
ggtcgagcggatgtgattctcgaccgcgaaggcggtgtcacggaggcgttggcgatcgtc
gactacaaaacctcaacgtccggcgatcacgagcagcatgcgcttcagctgcaggtctat
gccgacgccgggcgtcgagagggactggacgtgcgagccgcatacgtgcatgacctcaaa
catgcgacgcgtatgccgatcgaggtggacgccgaggccatcgcacgagcggaggcgacg
gtcaccgaagcggctgagcgtgtcaaggcgcgtgactatcggcccaatcccggtgcgcga
tgccgcggatgcgaggtacgaacaatctgcggctccgcgcgttga
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