Couchioplanes caeruleus: COUCH_18055
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Entry
COUCH_18055 CDS
T08133
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaz03021
]
COUCH_18055
Transcription machinery [BR:
ccaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COUCH_18055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
STAS
STAS_2
Sigma70_r4_2
HTH_23
HTH_24
HTH_Crp_2
HTH_10
MarR_2
DUF7343
Sigma70_ECF
HTH_3
GerE
KORA
Motif
Other DBs
NCBI-ProteinID:
UQU68067
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Position
3918358..3919497
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AA seq
379 aa
AA seq
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MPAQEDSSTRVLEDLDAAAVEYATRISGASGPARAALRDELTRICLPFAGRMARRYRGRG
ENLEDLEQVARLGLVKAIDRYDPERGSFTAYAVITISGEIKRHFRDRTWGVHVPRRVQDL
SLEVGHASMVLTTELSRTPTPAEIATRLGVPLPAVLEALESAAGYSPSSLNAPAGGDGAA
EFGDLLGGTDSDLEMVDDKLTVAGLLLRLPARERRMLAMRFYGNRTQAEIATELGISQMH
VSRLLSRSLAWLREAMLSDALPRWEGANGPTDPHGMQIAVQHGDGVLTVRVQGEVDRDTA
ERLRTALRHAVSSLGGDRLVIDLAGVPLVDAAGVAVLIDAASAASVAEADLTLAGTQPYV
ARILGVSGLQNLLEKRRRS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacaggaggactcctcgacgcgcgtcctcgaggatctcgacgccgccgccgtg
gagtacgccacccggatctccggcgcctccggccccgcgcgggccgcgctgcgtgacgag
ctgacgcggatctgcctgccgttcgccggtcgcatggcgcgccggtaccgggggcggggc
gagaacctcgaggatctcgagcaggtcgcccggctgggcctggtgaaggcgatcgaccgg
tacgaccccgagcgcggctccttcacggcgtacgcggtcatcaccatttccggtgagatc
aagcggcacttccgtgaccggacgtggggggtgcacgtgccgcggcgggtgcaggacctg
agcctggaggtcgggcacgcctcgatggtgctgaccacggagctgtcccgcacgccgacg
ccggccgagatcgccacgcggctcggtgtgccgctgccggccgtgctggaggccctggag
tccgccgccgggtattcgccgtcgtcgctcaacgcccccgcgggcggtgacggggccgcc
gagttcggtgacctgctgggcggcacggacagtgacctcgagatggtcgacgacaagctc
accgtcgccgggctgctgctgcgcctgccggcccgcgagcggcggatgctcgcgatgcgc
ttctacggcaaccggacccaggcggagatcgcgaccgagctcggcatctcgcagatgcac
gtgtcgcggctgctcagccggtcgctggcgtggctgcgcgaggcgatgctcagcgacgcg
ctgccgcgctgggagggtgcgaacggccccacggatccgcacggcatgcagatcgcggtg
cagcacggcgacggcgtcctgaccgtacgggtgcagggcgaggtcgaccgggacaccgcc
gaacggctgcggacggcgctgcgccacgcggtgtcgtcgctgggtggtgaccggctggtg
atcgacctggccggggtgccgctggtggacgcggccggggtggcggtgctcatcgacgcg
gcctcggcggcgtcggtggcggaggcggatctgacgctggccggcacgcagccgtacgtg
gcgcgcatcctcggtgtctcggggctgcagaacctgctggagaagcgccgccggtcctga
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