Couchioplanes caeruleus: COUCH_18445
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Entry
COUCH_18445 CDS
T08133
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaz03019
]
COUCH_18445
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
COUCH_18445
Messenger RNA biogenesis [BR:
ccaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
COUCH_18445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
MTR4-like_stalk
wHTH-PRTase_assc
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
UQU68135
LinkDB
All DBs
Position
3995316..3998096
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AA seq
926 aa
AA seq
DB search
MTSPAERYAESKRRAARVAEFPALDDFMLDVGFDLDDFQRQACEALERGSGVLVCAPTGA
GKTVVGEFAVHLALRADGSGTRRKCFYTTPIKALSNQKYHDLVERYGAEHVGLLTGDNAI
NGDAPVVVMTTEVLRNMLYSGSASLQGLAYVVMDEVHYLADRFRGAVWEEVIIHLPASVT
LVSLSATVSNYEEFADWLVTVRGETEVVVSEHRPVPLWQHMLVGRRMFDLFHDADAARKH
DVHPELLRYTREMLRRLELTDRAAGPGWQGRGGRPRRWQGPPRAEVVDRLDRAGLLPAIL
FIFSRAGCDAAVQQCLAGGLRLTGPEERAEIREIAQAKVASIPAEDLSVLGYWEWLDGLE
RGVAAHHAGMLPAFKEAVEECFVRGLVKAVFATETLALGINMPARCVVLERLVKFNGEAH
VDLTPGEYTQLTGRAGRRGIDVEGHAVVVWSPEVDPRHVAGLASTRTYPLRSSFRPSYNM
AVNLVGSVGADKSRDLLESSFAQFQADRSVVGLARQVQRNVDTMQTYGQDAACHHGDFDE
YFGIRVAIADREKALARQGASQRRAAAVSSLEKLRVGDVIRVPQGRRAGLAVVLEPPTGG
FGEPRPLVLTQDRWAGRVSPADFPGAVEVLDRIRVPKHFNPRSPAARRDLAASISATGLD
RHERAGGRRGRSRGVPGEDAEIALLKVQLRQHPCHACPDREEHARWAERRHRLERDTEAL
RDKVAGRTGSLAKTFDQVCAVLTERGYLSPDGEVTEPGRMLGRIWTEADLLVAECLRRGV
WEGLEPDELAAAVSMVLYESRREGDERASVPKGATTAAVDACQKLWAEIESQEAAHGLSL
TREPDPGFVWPIYRWARGEPLARVLASGHNYESDMPAGDFVRWARQVLDLLTQLKDASSA
SPGVREAARKAMTAINRGVLAYQTAL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccccgccgaacgttatgcggagtcgaagaggcgggcggcccgcgtggccgag
ttcccggccctcgacgacttcatgctggacgtcggcttcgacctggacgatttccaacgg
caggcctgcgaggccctggagcgcggcagcggcgtgctggtgtgcgcgcccaccggcgcc
ggcaagacggtggtcggggagttcgcggtgcacctcgcgctgcgcgccgacggttccggc
acccggcggaagtgcttctacaccaccccgatcaaggcgctgtccaaccagaagtaccac
gacctcgtcgagcggtacggcgccgagcacgtcggcctgctgaccggtgacaacgcgatc
aacggcgacgctccggtggtggtgatgaccaccgaggtgctgcgcaacatgctctactcg
ggctcggcgagcctgcagggcctggcgtacgtggtgatggacgaggtgcactacctcgcc
gaccggttccgcggcgccgtctgggaagaggtgatcatccaccttcccgcctccgtcacg
ttggtctccctgtccgccacggtcagcaactacgaggagttcgccgactggctggtgacc
gtccgcggcgagaccgaggtggtggtcagcgagcaccggcccgtgccgctgtggcagcac
atgctcgtcggccggcgcatgttcgacctgttccacgacgccgacgcggcccgcaagcac
gacgtgcacccggagctgctgcgctacacccgcgagatgctgcgccggctggagctcacc
gaccgcgccgccggcccggggtggcagggccgcggtggccggccccgccgctggcaggga
ccgccgcgggccgaggtggtcgaccggctcgaccgtgccgggctgctgcccgcgatcctg
ttcatcttcagccgcgccggctgcgacgccgccgtgcagcagtgcctggccggcggtctg
cgcctgaccgggcccgaggagcgcgccgagatccgcgagatcgcccaggcgaaggtcgcg
agcatcccggccgaggacctgtcggtgctcggctactgggagtggctcgacggcctcgag
cgcggcgtcgcggcccaccacgcgggcatgctccccgcgttcaaggaggccgtggaggag
tgcttcgtgcggggcctggtcaaggcggtgttcgccacggagaccctcgcgctgggcatc
aacatgccggcccgctgcgtggtgctggaacgcctggtcaagttcaacggcgaggcccac
gtggacctgacgccgggggagtacacgcagctcaccggccgggccgggcggcgcggcatc
gacgtcgagggccacgccgtggtggtgtggagccccgaggtggacccgcggcacgtcgcc
gggctcgcgtccacgaggacgtacccgttgcggtccagcttccgtccctcgtacaacatg
gcggtcaacctggtcggctcggtgggcgcggacaagtcgcgtgacctgctcgagtcgtcg
ttcgcgcagttccaggcggaccggtcggtggtcgggctggcccgccaggtgcagcgcaac
gtcgacaccatgcagacgtacgggcaggacgccgcctgccaccacggcgacttcgacgag
tacttcggcatccgcgtcgcgatcgccgaccgggagaaggccctggcccgccagggtgcg
tcgcagcgccgggcggcggcggtgtcgtcgctggagaagctgcgcgtgggcgacgtcatc
cgggtgccgcagggccgccgggccggcctcgccgtggtgctggagccgcccaccggcggg
ttcggcgagccgcgcccgctggtgctcacccaggaccgctgggccggccgggtcagcccc
gccgacttcccgggcgcggtcgaggtcctggaccgcatccgggttcccaagcacttcaac
ccgcgctcgcccgccgcccgccgcgacctcgccgcgtcgatcagcgccaccgggctcgac
cggcacgaacgggccggcggccggcgcgggcgcagccgcggcgtgcccggcgaggacgcg
gagatcgcgttgctcaaggtgcagctgcgccagcacccgtgccacgcctgcccggaccgc
gaggagcacgcccgctgggccgagcgccggcaccggctggagcgcgacaccgaggcgctg
cgcgacaaggtcgccgggcgcaccggatcgctggccaagacgttcgaccaggtctgcgcg
gtgctcaccgagcgcggctacctgtccccggacggcgaggtcaccgaaccgggacggatg
ctgggccgcatctggacggaggcggacctgctcgtcgcggaatgcctgcgccgcggcgtc
tgggagggcctcgagcccgacgagctggcggcggcggtgtccatggtcctgtacgagtcc
cggcgcgagggcgacgaacgggcctcggtgcccaagggcgccaccaccgcggcggtcgac
gcctgccagaagctgtgggcggagatcgagtcgcaggaggcggcgcacgggctgtcgctg
acccgcgaacccgacccgggcttcgtctggccgatctaccgctgggcccgcggcgagccg
ctcgcccgggtgctggccagcgggcacaactacgagtcggacatgccggcgggcgacttc
gtgcgctgggcccggcaggtgctggacctgctcacgcagctcaaggacgcgtcgtcggcg
tcgccgggagtgcgggaggcggcccgcaaggcgatgacggcgatcaaccggggggtgctg
gcctaccagaccgccctctga
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