Couchioplanes caeruleus: COUCH_20825
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Entry
COUCH_20825 CDS
T08133
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaz03000
]
COUCH_20825
03036 Chromosome and associated proteins [BR:
ccaz03036
]
COUCH_20825
Transcription factors [BR:
ccaz03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
COUCH_20825
Chromosome and associated proteins [BR:
ccaz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
COUCH_20825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_20
HTH_IclR
MarR_2
MarR
HTH_23
HTH_11
HTH_28
HTH_Crp_2
Sigma70_r4_2
HTH_47
HTH_1
HTH_9
HTH_5
HTH_10
GGDEF_2
LexA_DNA_bind
HTH_CodY
Fe_dep_repress
TrmB
HTH_36
Sigma70_r4
Rv2175c_wHTH
HTH_Tnp_ISL3
HTH_31
HTH_Mga
Xre-like-HTH
Rrf2
Motif
Other DBs
NCBI-ProteinID:
UQU61503
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All DBs
Position
4504934..4505386
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AA seq
150 aa
AA seq
DB search
MEEIDRAIVGALTADGRLSYTDLAERVGLSVSAVHQRVRRLEQRGVINGYTAKVSYEALE
LPLTAFVAIRPFDPSQPDDAPERLAHLSEIDSCYSVAGEDFYLLLVRVASPADLERLLQE
IRTAANVTTRTTVVLSTPYENRPPRMAPAG
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
gtggaagagatcgaccgggcgatcgtgggcgccctcaccgcggacggccggctgtcctac
accgatctcgccgaacgggtcgggctgagcgtgtccgccgtgcaccagcgggtacgccgc
ctcgagcagcgcggggtcatcaacgggtacacggcgaaggtgtcgtacgaggcgctcgag
ctgccgttgaccgcgttcgtcgcgatccgcccgttcgacccgtcgcagccggacgacgcg
ccggagcggctggcgcatctgtccgagatcgactcctgctattcggtggcgggtgaggac
ttctacctgctgctggtgcgggtggccagcccggcggatctcgagcggctgctgcaggag
atccgtacggcggcgaacgtgaccacgcggacgacggtggtgctgagcacgccgtacgag
aaccgtccgccgcggatggctccggccggctga
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integrated database retrieval system
