Couchioplanes caeruleus: COUCH_23335
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Entry
COUCH_23335 CDS
T08133
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaz03021
]
COUCH_23335
Transcription machinery [BR:
ccaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COUCH_23335
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_Crp_2
MarR
Sigma70_ECF
HTH_31
HTH_23
NirdL-like_HTH
MarR_2
HTH_24
DUF7343
HTH_10
KORA
DUF134
GerE
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
UQU61973
LinkDB
All DBs
Position
5031448..5032212
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AA seq
254 aa
AA seq
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MTMTKTRVPESGTTLLRDMAATPAGPRRAALRDEAVRVWLPLAQHLAHRYSGRGEPDDDL
LQTATVGLIKAIDRFDPTRGVEFAGFAIPTILGEIRRHFRDRTWSVRVPRRMQELRMAIT
EAGNALTQTLGRSPTVADIATHLGTTEEEVLEGLEGARAYSAASLSTPVTEDGATSLGDT
LGEDDHEMQLAELRIALGPAMATLDERERTILSLRFFGNLTQSEIAEKIGVSQMHISRLI
ARSLAKLRTELTAG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaccaagacgcgcgtacccgagagcggcaccaccctgctgcgggacatggcg
gccaccccggccggcccgcggcgggcggcgctgcgcgacgaggcggtgcgggtctggctg
ccgctggcgcagcacctggcgcaccgctacagcggccgcggcgagcccgacgacgacctg
ctgcagaccgcgacggtgggcctgatcaaggcgatcgaccgcttcgaccccacccgcggc
gtcgagttcgccgggttcgcgatcccgaccatcctcggcgagatccggcgccacttccgc
gaccgcacctggtcggtccgcgtgccccggcgcatgcaggagctgcgcatggccatcacc
gaggccggcaacgcgctcacccagaccctgggccgctcccccacggtcgccgacatcgcg
acccacctcggcaccaccgaggaagaggtgctcgagggactggagggcgcccgggcgtac
agcgcggcgagcctgtccaccccggtcaccgaggacggcgcgacgtcgctgggcgacacg
ttgggcgaggacgaccacgagatgcagctggccgagctgcggatcgcgctcggaccggcg
atggcgaccctcgacgagcgcgagcgcacgatcctgtcgctgcgcttcttcggcaacctg
acccagtcggagatcgcagagaagatcggggtgtcccagatgcacatctcccggctgatc
gcgcggtcactggccaagctccgcacggaactcaccgccggctga
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