Couchioplanes caeruleus: COUCH_23545
Help
Entry
COUCH_23545 CDS
T08133
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaz03032
]
COUCH_23545
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_23545
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
COUCH_23545
DNA replication proteins [BR:
ccaz03032
]
Prokaryotic type
DNA Topoisomerases
COUCH_23545
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
COUCH_23545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
WYL_2
Phage_int_SAM_1
Motif
Other DBs
NCBI-ProteinID:
UQU62015
LinkDB
All DBs
Position
complement(5072161..5073129)
Genome browser
AA seq
322 aa
AA seq
DB search
MRLRRSDLTKPGYGRRRSGKGFTYLDCDGKPLKDAGEVERAKALVIPPAWTDVWISPDPR
GHIQATGVDAAGRKQYVYHPEWRTARDEAKFDHALEVAEKLPDIRSQLCADLSSRGLTRS
RVLAAVTRLLDMGMFRVGSDQYAQREEDPSFGLSTLRPEHVRAGRGCVVLEFVGKSGKEH
ARPVADGEVCQVLRDLRKRRSGEERLFAYYDQRQKQWREVRADDINEYLREISGTQMSAK
DFRTWHGTVKAAEELAEAGPQKTKTARKKAVSHAMKEVAELLGNTPAVARASYVDPRVVE
AYEKGETVEEPTEEAVLDLLTD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcggcgtagcgacctcaccaagcccgggtacggccgccggcgcagcggcaag
ggcttcacatacctggactgcgacggcaagccgctcaaggacgccggcgaggtcgagcgg
gccaaggcgctcgtcatcccgcccgcctggaccgacgtgtggatcagcccggacccgcgc
gggcacatccaggccaccggcgtcgacgcggccggccgcaaacagtacgtttaccacccc
gagtggcgtacggcccgcgacgaggcgaagttcgaccacgcgctggaggtcgccgagaag
ctgcccgacatccgctcgcagctctgcgccgacctgagcagccggggactcacccgctcc
cgggtcctggccgccgtcacccgcctgctcgacatgggcatgttccgcgtcggcagcgac
cagtacgcccagcgcgaggaggacccctcgttcggcctgtccacgctgcgtcccgagcac
gtgcgtgccggccgcggctgcgtggtgctggagttcgtcggcaagtccggcaaggagcac
gcccggccggtggcggacggcgaggtctgccaggtgctgcgcgacctgcggaaacggcgc
tcaggggaggagcggctgttcgcgtactacgaccagcggcagaagcagtggcgggaggtc
cgcgccgacgacatcaacgagtacctgcgcgagatcagcggcacgcagatgagcgcgaag
gacttccggacctggcacggcaccgtcaaggccgccgaggagctggccgaggcgggaccg
cagaagacgaagaccgcccgcaagaaggccgtctcgcacgcgatgaaggaggtcgccgag
ctgctcggcaacacccccgcggtggcgcgcgcctcgtacgtggacccgcgcgtggtcgag
gcgtacgagaagggcgaaacggtcgaggaaccgaccgaggaagccgtgctcgacctcctc
accgactga
DBGET
integrated database retrieval system
