Couchioplanes caeruleus: COUCH_23945
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Entry
COUCH_23945 CDS
T08133
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COUCH_23945 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaz03019
]
COUCH_23945 (recQ)
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_23945 (recQ)
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COUCH_23945 (recQ)
Messenger RNA biogenesis [BR:
ccaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
COUCH_23945 (recQ)
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
COUCH_23945 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UQU62089
LinkDB
All DBs
Position
5159802..5161649
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AA seq
615 aa
AA seq
DB search
MTSAPPLTGPAYDVLNRVFGYAEFRGGQHEIIEHVIAGGDALVLMPTGGGKSLCYQIPAL
VRPGTGVVISPLIALMQDQVDALRTLGVRAGFLNSTQESHERRRTEQQFLAGELDLLYVA
PEGLGSPATQRLLDQGRIALFAIDEAHCVAQWGHDFRPDYLNLSMLHERWPDVPRIALTA
TATSATREEIATRLDLTGARHFTASFDRPNIQYRIVGKNEPRRQLLELLRTEHAGDAGIV
YCLSRASVEKTAEFLTQQGIAALPYHAGLDAQTRAANQSRFLREDGLVMVATIAFGMGID
KPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIETSDGDAAH
RRNLGAHLDAMLALCETVQCRRAQLLAYFGQAAEPSCGNCDTCLNPPESWDGTIPAQKLL
STVLRLQRERGQKFGAGQSIDILLGKTTEKVTQFRHHELSVFGIGTDLREQEWRGVVRQL
LAQGLLAVEGDYGTLVLTDASGSVLRREREVMLRREPERTRAPRARRTSSGGGGAAPAAD
LDPAGAAAFERLRAWRASAAKEAGVPAYVIFHDATLRQIAALQPGSLAELSTVSGVGENK
LAKYGQPVLEALAAG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccgctcccccgctcaccggccccgcgtacgacgtgctcaaccgcgtgttcggc
tacgccgagttccgcggcgggcagcacgagatcatcgagcacgtcatcgccggtggcgac
gcgctggtgctcatgcccaccggcggcggcaagtcgctgtgctaccagatccccgcgctg
gtgcgcccgggcaccggcgtggtgatctcgccgctgatcgcgctgatgcaggaccaggtc
gacgcgctgcgcacgctcggcgtgcgggccggcttcctcaactcgacccaggagtcgcac
gagcggcgccgcaccgagcagcagttcctcgccggcgagctggacctgctctacgtcgcg
cccgagggcctcggttcgccggccacccagcggctgctcgaccagggcaggatcgccctg
ttcgcgatcgacgaggcgcactgcgtcgcccagtggggccacgacttccgccccgactac
ctcaacctgtcgatgctgcacgagcgctggcccgacgtgccgcgcatcgcgctgaccgcc
accgcgaccagcgccacccgcgaggagatcgcgacccggctcgacctgaccggcgcccgg
cacttcaccgcgagcttcgaccggcccaacatccagtaccggatcgtggggaagaacgag
ccccgccgccagctgctcgagctgctgcgcaccgagcacgccggcgacgccggcatcgtc
tactgcctgtcgcgcgcctcggtggagaagaccgccgagttcctcacccagcagggcatc
gccgccctgccgtaccacgccggcctcgacgcgcagacccgcgcggcgaaccagagccgg
tttttgcgcgaggacggcctggtcatggtcgcgacgatcgcgttcggcatgggcatcgac
aagccggacgtgcggttcgtggcgcacctcgacctgcccaagtcggtggagggctactac
caggagaccgggcgcgccgggcgcgacgggctgccgtcgacggcgtggctggcgtacggg
ctgcaggacgtggtccagcagcgcaagatgatcgagacctcggacggcgacgcggcgcac
cggcgcaacctgggcgcgcacctcgacgcgatgctcgcgctgtgcgagacggtccagtgc
cgccgcgcgcagctgctcgcctacttcggccaggccgcggagccgtcctgcggcaactgc
gacacctgcctgaacccgccggagtcgtgggacggcacgatcccggcccagaagctgctc
tccacggtgctgcggctgcagcgcgagcgggggcagaagttcggcgccggccagtccatc
gacatcctgctcggcaagaccaccgagaaggtgacccagttccgccaccacgagctgtcg
gtgttcggcatcggcaccgacctgcgcgagcaggagtggcgcggcgtggtccgccagctg
ctggcccaggggctgctcgcggtcgagggcgactacggcacgctggtgctcaccgatgcc
agcggcagcgtcctgcgccgcgagcgggaggtcatgctgcgccgtgagccggagcgcacc
cgcgcgccccgggcccggcgcacgtcctccggcggcggcggggcggcgcccgcggcggac
ctcgacccggcgggcgcggcggccttcgagcggctgcgcgcctggcgggcctcggcggcg
aaggaggccggcgtcccggcgtacgtgatcttccacgacgcgaccctgcgccagatcgcc
gcattgcagcccggttcgctggcggagctgtccaccgtcagcggcgtcggcgagaacaag
ctcgcgaagtacggccagccggtcctcgaggccctcgccgccgggtaa
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