Couchioplanes caeruleus: COUCH_24170
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Entry
COUCH_24170 CDS
T08133
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz00040
Pentose and glucuronate interconversions
ccaz01100
Metabolic pathways
ccaz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COUCH_24170
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
COUCH_24170
Enzymes [BR:
ccaz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
COUCH_24170
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
UQU62131
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Position
5202074..5203456
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AA seq
460 aa
AA seq
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MRGRLASAAVIPTLILSTVSPAAASTTADATAPTAAHAIAPFAGHGGVPAGALRPARQAL
APDDGWAAAGAGTTGGSAADDAHITVAHNRAELLTALGGAANAVPKIVFVSGRIDMDAGP
DGTPLTCADYADPEYDLDAFLRTYDPAVWGRTEKPSGPLEEARARSAQRQGAQIRIPVGS
NTTLIGIDGARIAHGSLTLTGVGNVIVRNIAFTDAADCFPAWDPTDGSAGNWNSLYDLVS
LSGATNVWIDHDTFSDGNNHDADQPLYFGRPYQVHDGATDIIRGSDLVTVSYNDYYDHDK
TMLIGSTDTAGVDVGKLRVTVHHNRFGNVLQRAPRVRYGQVDVYDNAYTLTDDDYSYSLG
AGVGSAIYAENNFFVRSADVPDADIIKDWKGTRITAIGSLVRVGSGPAVPVDLVAAHNAA
YDPDLSPDAGWVPVLRPRLDPTAAVPGLVARSAGAGKLGC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggacgcctggcctcagcagccgtcatccccaccctgatcctcagcaccgtcagc
ccggccgccgcgtccaccaccgcggacgccaccgcgcccaccgccgcgcatgccatcgcg
ccgtttgccgggcacgggggcgtcccggccggggccctgcggccggcccggcaggcgctg
gcgcccgacgacggctgggccgccgccggagccggcacgaccggtggctccgccgcggac
gacgcgcacatcaccgtggcgcacaaccgcgccgagctgctcaccgccctgggcggcgcg
gcgaacgccgtaccgaagatcgtcttcgtcagcggccggatcgacatggatgccggcccc
gacggcacgccgctgacctgcgcggactacgccgaccccgagtacgatctcgacgccttc
ctgcgtacctatgatccggcggtctggggtcgcaccgagaaaccgtccgggccgctcgag
gaagcccgcgcccggtcggcgcagcggcagggcgcgcagatccggatcccggtcggcagc
aacaccacgctgatcggcatcgacggggcgcgcatcgcgcacggcagcctgaccctgacc
ggcgtgggcaacgtgatcgtgcgcaacatcgcgttcaccgacgcggcggactgcttcccc
gcctgggatcccaccgacggttccgccggcaactggaactcgctctacgacctggtgtcg
ctcagcggcgcgacgaacgtctggatcgaccacgacacgttcagcgacggcaacaaccac
gacgccgaccagccgctgtacttcgggcggccgtaccaggtgcacgacggggcgaccgac
atcatccgcgggtccgacctggtcaccgtgtcctacaacgactactacgaccacgacaag
acgatgctgatcggctcgaccgacaccgccggggtggacgtcgggaagctgcgggtcacc
gtccaccacaaccggttcggcaacgtgctgcagcgggcgccgcgggtgcggtacgggcag
gtcgacgtctacgacaacgcgtacacgctgaccgatgacgactactcgtactcgctgggc
gccggggtgggttcggcgatctacgcggagaacaacttcttcgtgcgcagcgccgacgtg
cccgacgccgacatcatcaaggactggaagggtacgcggatcacggcgatcggctcgctc
gtgcgggtcggcagcgggccggccgtacccgtggacctggtggccgcgcacaacgccgcg
tacgacccggacctgtcgcccgacgcaggatgggtgcccgtgctgcgtccccggctggac
ccgaccgcggccgtccccggtctcgtggcccgatccgccggcgccggcaagctcggctgc
tga
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