Couchioplanes caeruleus: COUCH_24235
Help
Entry
COUCH_24235 CDS
T08133
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COUCH_24235 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccaz01007
]
COUCH_24235 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaz03016
]
COUCH_24235 (lysS)
Enzymes [BR:
ccaz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
COUCH_24235 (lysS)
Amino acid related enzymes [BR:
ccaz01007
]
Aminoacyl-tRNA synthetase
Class I (A)
COUCH_24235 (lysS)
Transfer RNA biogenesis [BR:
ccaz03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
COUCH_24235 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
UQU62143
LinkDB
All DBs
Position
5219236..5220957
Genome browser
AA seq
573 aa
AA seq
DB search
MAEVAGAVDWVSRFADEVIAEAQRRSPGKPVVCASGLSPSGPIHLGNLREVMTPHLVADE
IRRRGHEVVHLISWDDYDRFRKVPAGVDASWAEHIGKPLTAVPAPPGSRFPNWAEHFKAA
MIDSLAELGVDYRGISQTEMYTSGAYREQILLAMRERHRIDAILDRYRTKGRTAAPKAAK
LDADEAAAAAQAAEGSGAADEDDGGAGSGYYPYKPYCGSCGKDTTTVTAYDDETTAMTYV
CADGFTETVLLSEFDRGKLVWKVDWPMRWAYEGVHFEPSGVDHSSPGSSFVVGGQIVTEI
FGGEQPIGPMYAFVGITGMAKMSSSRGAVPTPADAMAIMEAPLLRWMYARRRPNQSFKVA
FDAEIQRLYDEWDALEGKIAAGTAAPADVSAHDRAVRTAGVTLPRTPVPIAYRTLASIVD
ITTGHDEQTLRILRDIDPQRPVTDLAQVRPRLDKAQTWVNTQLPAEARTQVLAEPDKELL
ASLDDDQRESLRLLAAGLDDHWSLEGLTTLVYGVPKVMAGLPPDTKPTNELKVAQRSFFV
LVYRLLIGKETGPRLPTLLLAVGADRIRTLIGG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaagttgcaggagccgtcgactgggtgagccggttcgccgacgaggtgatcgcc
gaggcgcagcgccgttcgccgggcaagccggtggtgtgcgcgtccgggttgagcccgtcc
gggccgatccacctgggcaacctgcgtgaggtgatgacgccgcacctggtcgccgacgag
atccgccggcgcggccacgaggtcgtgcacctgatctcgtgggacgactacgaccggttc
cgcaaggtgccggccggcgtcgacgcgtcgtgggccgagcacatcggcaagccgctgacc
gccgtgcccgcgccgcccggcagccgcttccccaactgggccgagcacttcaaggccgcg
atgatcgactcgctggccgagctgggcgtcgactaccgcggcatctcccagaccgagatg
tacacctcgggggcgtaccgggagcagatcctgctggccatgcgcgagcggcaccggatc
gacgcgatcctggaccgctaccgcaccaagggccggaccgccgcgccgaaggcggcgaag
ctggacgcggacgaggccgccgctgccgcccaggcggccgagggctccggcgccgccgac
gaggacgacggcggcgcgggcagcggctactacccgtacaagccgtactgcgggtcgtgc
ggcaaggacaccacgacggtcaccgcgtacgacgacgagaccaccgcgatgacgtacgtg
tgcgccgacgggttcaccgagaccgtgctgctcagcgagttcgaccggggcaagctggtg
tggaaggtcgactggccgatgcggtgggcgtacgagggcgtgcacttcgagccctccggc
gtcgaccactcgtcgccggggtcgtcgttcgtcgtcggcggccagatcgtcaccgagatc
ttcggcggtgagcagccgatcggcccgatgtacgcgttcgtcggcatcaccggcatggcg
aagatgtccagctcccgcggcgcggtgccgaccccggccgacgcgatggccatcatggag
gcgccgctgctgcgctggatgtacgcccgccgccgccccaaccagtcgttcaaggtcgcg
ttcgacgccgagatccagcgcctgtacgacgagtgggacgcgctcgagggcaagatcgcc
gcgggcaccgccgcccccgccgacgtgtccgcccacgaccgcgccgtccgcaccgccggg
gtcacgctgccccgcacgccggtgccgatcgcgtaccggacgctcgcctcgatcgtcgac
atcaccaccggccacgacgagcagaccctgcggatcctgcgcgacatcgacccgcagcgc
ccggtcaccgacctggcccaggtgcgcccgcggctggacaaggcgcagacctgggtgaac
acccagctgccggcggaggcccgcacccaggtcctggccgagccggacaaggagctgctc
gcctcgctcgacgacgaccagcgcgagtccctgcggctgctcgcggcgggtctggacgac
cactggtcgctcgaggggctgaccacgctcgtgtacggcgtaccgaaggtcatggcgggc
ctgcccccggacaccaagccgacgaatgagctgaaggtcgcgcagcggtcgttcttcgta
ctggtctaccgcctgctgatcggcaaggagaccggcccgcggctgcccacgctgctgctc
gcggtgggcgccgaccgcatccgcacgctcatcggcggctga
DBGET
integrated database retrieval system
