Couchioplanes caeruleus: COUCH_26995
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Entry
COUCH_26995 CDS
T08133
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz03030
DNA replication
ccaz03430
Mismatch repair
ccaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COUCH_26995
03430 Mismatch repair
COUCH_26995
03440 Homologous recombination
COUCH_26995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaz03032
]
COUCH_26995
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_26995
Enzymes [BR:
ccaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COUCH_26995
DNA replication proteins [BR:
ccaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
COUCH_26995
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
COUCH_26995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
TerB
PTCB-BRCT
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UQU62663
LinkDB
All DBs
Position
complement(5831856..5833073)
Genome browser
AA seq
405 aa
AA seq
DB search
MYAVVDVETTGLRTSWHDRVVEVAVVHLDQDGHVMDEWCSLVNPHRDLGPQQVHGITARE
ARRAPAFSDLAGELTSRLAGRVLVAHNLTFDAMFLAAEYQRIGVVAPVRADAGLCTMQLA
AHFLPTASRSLHDCRRAAGMPTHRAHSALHDARAAADLLAYYLLAAGSPPSWAATVARAA
TTPWPELPPSGAVPVQRTSAEHRQEHFLARLIDRLPRQREPRADAYMDLLDRALLDRHIS
ATEADALVETAETLGLARADVAHLHEQYLAQLAWVALSDNVLTESERQDLNDVALLLGLP
ARSAAQALEVAEAWSAQRGGAPERQRWQLQPGDLVVFTGTMSPPREEWQAEAAAAGLDVG
NNVTKKTKLLVAADPDSMSGKAEKARRYGIPIVHPTAFQQMLNIV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgccgtagtcgacgtggagaccaccggcctgcgtaccagctggcacgaccgtgtc
gtcgaggtggcggtcgtccacctcgaccaggacggtcacgtgatggacgagtggtgcagc
ctcgtcaacccccaccgcgacctgggacctcagcaggtccacggcatcacggcgcgggaa
gcccggcgtgcaccggccttcagtgacctggccggtgagctgaccagccggttggccggc
cgcgtgctggtggcccacaacctcaccttcgatgccatgtttctcgccgcggaataccag
cgaatcggcgtcgtggcaccggtacgcgcggacgccggcctctgcaccatgcagttggct
gcgcacttcctgcccaccgcctcccgcagcctgcatgactgccgacgcgcagcaggcatg
ccgactcacagggctcactccgcgctgcatgacgcgcgcgcagcagcggacctcctcgcc
tactacctcctcgccgcgggatcaccgccgtcatgggccgccacggttgcgcgagccgca
acgactccatggcctgagctgccgccctcgggagcggttcccgtgcagaggacgtcagcg
gaacatcggcaggagcacttccttgcccggttgatcgatcggcttccccggcagcgtgag
ccacgagccgacgcctacatggacctcctcgaccgggcactcctcgaccggcacatctct
gcgacggaggccgacgcccttgtggaaactgcggagactctggggctggcccgcgcagac
gttgctcacctgcacgagcagtatctcgctcagctcgcgtgggtcgccctctccgacaac
gtgctgaccgaatcagagcgacaggacctcaacgacgtggcgctccttctcggccttccc
gcgagatccgctgcgcaggcgctggaagtggccgaggcctggtccgctcagcgtggtggt
gcgccggaacgtcagcggtggcaattgcagcccggggaccttgtcgtcttcacgggcacc
atgagcccgccgcgcgaggagtggcaagcggaggcggccgctgccggcctcgacgtcggg
aacaacgtcaccaagaagacgaagctgctcgtcgccgccgatccggactccatgtcgggg
aaggccgagaaggcccgtcggtacggcatccccatcgtgcacccgaccgcttttcagcag
atgttgaacatcgtctga
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