Couchioplanes caeruleus: COUCH_29255
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Entry
COUCH_29255 CDS
T08133
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz03030
DNA replication
ccaz03410
Base excision repair
ccaz03420
Nucleotide excision repair
ccaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COUCH_29255 (polA)
03410 Base excision repair
COUCH_29255 (polA)
03420 Nucleotide excision repair
COUCH_29255 (polA)
03440 Homologous recombination
COUCH_29255 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaz03032
]
COUCH_29255 (polA)
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_29255 (polA)
Enzymes [BR:
ccaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COUCH_29255 (polA)
DNA replication proteins [BR:
ccaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
COUCH_29255 (polA)
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
COUCH_29255 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
COUCH_29255 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UQU63083
LinkDB
All DBs
Position
complement(6340288..6342981)
Genome browser
AA seq
897 aa
AA seq
DB search
MSDDAQTPRLLLLDGHSLAYRAFFALPVENFSTQTGQPTNAVFGFTSMLINMLRDEKPTH
IVVAFDVSRQSFRTEKYADYKAGRSETPQPFLGQVSLVKEVLQALRIPVVEKPGYEADDV
IGTLSCQARDAGFDVVISTGDRDAFQLAGEHVTILYPVRGVSEVWRMTPEAIEAKYGVPP
ERYRDKAALVGEASDNLPGVPGVGDKTAAKWINQYGGLDGIIAHVDEIKGKAGENLRAHL
ADVMRNYEINALVCDLELPLRPEDVKWQGWDREAVHQVFDALEFRVLRERLYSYLETVEP
EAEAGFDLSGTVLRTGEVAAWLGRHAAAAPVGVAVTGSFGRGTGSLTGIAVATGDGPAAW
FDPAALDEADERAVAAWLADPDRPKIIHDAKPAMLAFRAHGWSLAGVRVDTALAAYLAKP
DQRAYDLTDLALRYLKRELRVDAPDDGQLTFDGLGEDSAAAEQNVMLRARATLDLADTLI
EELSRDDGASQRLLAEVEQPLEIVLGEMEHVGIAADTQYLSELEAHFAAEVKAAQQAAHE
VVGREFNLGSPKQLQEILFVERNLPKTKRIKSGYTTDADALQSLFAQTGDPLLEHLLRHR
DVAKLKSTVDGLLKSVSEDGRIHTTFNQTVAATGRLSSTDPNLQNIPIRTEEGRRIRRAF
VVGEGYESLMTADYSQIEMRIMAHLSGDEALIAAFNSGADFHAATASSVFHVPVEEVVPD
QRRKIKAMNYGLAYGLSAFGLSNQLTITTEEARGLMTEYFERFGGVRDYLQAVVRRAVQD
GYTATILGRRRYLPDLSSDNRQRREMAERMALNAPIQGSAADIIKLAMLHIDTAIREAGL
KSRMLLQVHDELVFDVAPGEREPLESLVRREMGAAYPLSVPLEVSVGLGHDWNSADH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgacgcccagaccccccgcttgctgctgctcgacggccactcgctggcctac
cgggccttcttcgcactgcccgtggagaacttctccacgcagacggggcaacccaccaac
gccgtgttcggcttcacctcgatgctcatcaacatgctgcgcgacgagaagccgacgcac
atcgtggtggcgttcgacgtctcccggcagtccttccgcacggagaagtacgcggattac
aaagccggccgctccgagaccccgcagcccttcctgggccaggtgagcctggtcaaggag
gtgctgcaggcgctgcgcatcccggtggtggagaagcccggctatgaggcggacgacgtc
atcggcacgctctcctgccaggcccgcgacgccggcttcgacgtggtcatctccaccggt
gaccgggacgcgttccagctcgccggcgagcacgtgacgatcctctacccggtccgcggc
gtgtccgaggtctggcggatgacgcccgaggccatcgaggcgaagtacggcgtgcccccc
gagcgctaccgcgacaaggccgccctggtcggcgaggcgagcgacaacctgcccggcgtg
cccggcgtgggtgacaagaccgccgccaagtggatcaatcagtacggcggcctcgacggc
atcatcgcccacgtcgacgagatcaagggcaaggccggcgagaatctgcgcgcccatctc
gccgacgtcatgcgcaactacgagatcaacgcgctggtctgcgacctcgagctgccgctg
cgccccgaggacgtcaagtggcagggctgggaccgcgaggcggtgcaccaggtcttcgac
gcgctggagttccgggtcctgcgcgagcggctgtattcgtacctcgagaccgtcgagccc
gaggcggaggcgggcttcgacctgtccggcacggtcctgcgcaccggcgaggtggccgcc
tggctgggccgacacgccgccgcggctcccgtgggcgtcgccgtcaccggcagcttcggc
cgcggcaccggctcgctcaccggcatcgcggtggccaccggcgacggcccggccgcctgg
ttcgacccggccgccctggacgaggccgacgaacgggccgttgccgcctggctcgccgac
cccgaccggccgaagatcatccacgacgcgaagccggcgatgctcgcgttccgggcgcac
ggctggtcgctcgcgggcgtccgcgtcgacaccgccctcgccgcctacctcgccaagccc
gaccagcgggcgtacgacctcaccgacctggccctgcgctacctcaagcgggagctgcgc
gtcgacgcccccgacgacggccagctcaccttcgacggcctcggcgaggacagcgccgcg
gccgagcagaacgtcatgctccgcgcccgggccaccctcgacctcgccgacaccctcatc
gaggagctgtcccgcgacgacggcgcctcccagcgcctgctcgcggaggtcgaacagccg
ctcgagatcgtgctcggcgagatggagcacgtcggcatcgcggccgacacgcagtacctc
tccgagctcgaggcccacttcgccgccgaggtcaaggcggcccagcaggcggcgcacgag
gtggtcgggcgcgagttcaacctcggctcgcccaagcagctgcaggagatcctcttcgtc
gagcgcaacctgcccaagaccaagcgcatcaagtccggttacaccaccgacgccgacgcg
ctgcagagcctgttcgcccagaccggcgacccgctgctcgagcacctcctgcgccaccgc
gacgtggccaagctgaagtccacggtggacggcctgctcaagtcggtctccgaggacggg
cgcatccacaccacgttcaaccagaccgtggcggccaccggccggctctcctcgaccgac
cccaacctgcagaacatccccatccgcaccgaggagggccgccgcatccgccgcgccttc
gtggtgggggagggctacgagtcgctgatgacggccgactacagccagatcgagatgcgc
atcatggcgcacctctccggcgacgaggccctcatcgcggccttcaactcgggtgccgac
ttccacgcggccaccgcctcgagcgtcttccacgtcccggtcgaggaggtcgtccccgat
cagcgccgcaagatcaaggcgatgaactacggcctcgcgtacggcctcagcgccttcggc
ctgtccaaccagctcaccatcaccacggaggaagcccgtggcctgatgacggaatacttc
gaacgcttcggcggcgtccgcgactacctccaggccgtcgtgcgccgagcggtccaggac
ggctacacggccaccatcctcggccgccgccgttacctcccggacctgagcagcgacaac
cgccaacgccgcgaaatggccgaacgcatggccctcaacgcccccatccagggctcggcg
gccgacatcatcaaactggccatgctccacatcgacacggcgatccgtgaggccggcctc
aagtcccgcatgctcctccaggtccacgacgaactcgtcttcgacgtggcccccggcgaa
cgagaacccctcgaatccctcgtccgccgagaaatgggagcggcgtaccccctctcggtc
cccctcgaagtctcagtaggcctcggccacgactggaacagcgccgaccactga
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