Couchioplanes caeruleus: COUCH_29995
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Entry
COUCH_29995 CDS
T08133
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COUCH_29995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_29995
Enzymes [BR:
ccaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
COUCH_29995
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
COUCH_29995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UQU68673
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All DBs
Position
6506619..6507434
Genome browser
AA seq
271 aa
AA seq
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MAKAALPYADAAGSEAVQVYVSNSRGWALPPGDPKQDTLFRDGCGERGLPAYIHASLLVN
LGSPTELTVTRSVETLEHALQRGAAIGATAVVYHAGSSVDPAHDDKAMHQLREALLPLLD
RAAAQGLPKLLVEPSAGGGRSLASKVEDLGPYLAAVEHHPWLGVCFDTCHAWAAGHDLAT
PGGMTKTLDSLVATAGPDRLMLVHANDSKDDCGSTRDRHETIGKGRIGTAAFAELLAHPA
TAGIPVIVETPTEQHEGHAADIALLKGLRPA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
ctggccaaggccgccctgccgtacgcggacgcggcggggtcggaggcggtgcaggtctac
gtctccaactcccgcggctgggcgctgccgccgggcgacccgaagcaggacacgctcttc
cgcgacgggtgcggcgagcgggggctgccggcgtacatccacgcgtcactgctggtgaac
ctcggctcccccaccgagctcacggtcacccgctcggtcgagaccctcgagcacgccctg
cagcgcggcgcggccatcggcgcgacggccgtcgtctaccacgcgggcagctcggtcgat
ccggcccacgacgacaaggcgatgcaccagctccgcgaggcgctcctgcccctgctcgac
cgcgcggcggcgcaaggcctgccgaagctgctcgtcgagcccagcgccggcggcggccgc
agcctcgcgtccaaggtcgaggacctcgggccgtacctggcggcggtcgagcaccacccg
tggctgggcgtctgcttcgacacctgccacgcctgggcggccggccacgacctggccacc
ccgggcggcatgacgaagacactggactcgctggtggccacggccggcccggaccgcctg
atgctcgtgcacgccaacgactcgaaggacgactgcggttccacccgcgaccgccacgag
acgatcggcaagggccgcatcggcacggcggcgttcgccgagctgctcgcccacccggcc
acggccggcatcccggtgatcgtcgagacccccaccgaacagcacgagggccacgcggcg
gacatcgcgctgctcaagggcctccgtccggcatga
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