Couchioplanes caeruleus: COUCH_30195
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Entry
COUCH_30195 CDS
T08133
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz03030
DNA replication
ccaz03430
Mismatch repair
ccaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COUCH_30195
03430 Mismatch repair
COUCH_30195
03440 Homologous recombination
COUCH_30195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaz03032
]
COUCH_30195
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_30195
Enzymes [BR:
ccaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COUCH_30195
DNA replication proteins [BR:
ccaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
COUCH_30195
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
COUCH_30195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
UQU63253
LinkDB
All DBs
Position
6543007..6544806
Genome browser
AA seq
599 aa
AA seq
DB search
MVHPAYVQGTLDTLLSADGSVDPAALSLRDTTFVVLDLETTGGAPDGGGITEIGAVKVRG
GEELGVFGTLVNPGERIPPFITVLTGITEAMLAPAPPIEVVLPSLLEFLRGAVLVAHNAP
YDVGFLKAACARHGYQWPQVRVLDTAALARRALTRDEVPNRKLGTLAQFFRAAVQPTHRA
LDDAKATVDVLHGLIERLGSYKVHTLGDAVEFAKAVTPAQRRKRHLADDLPHAPGVYVFR
AADDRPLYVGTSVDIATRVRSYFTASEKRARMSEMIAAATRVEAVECAHSLEAEVRELRL
IAAHAPPYNRRSKYPERVVWLKLTTEAYPRLSVVRQLADDGAAYLGPFSSRRTAELAAAG
VYDALPVRQCTHKLSPRTVTPACALAELGRCPAPCEHKISAEEYAARAALPFRTATHGDP
EPLVEALLARIEGLSERQRYEEAAVIRSRLIALLRATVRMQRLGALTRLGELVAARRNDA
YGWEIVVVRHGRLAAAATSPPRLHPRPTLDLARATAETVLPGPGPVPAASAEETERILAW
LERPDTRLVETSGDWVSPARGAARFTRLLTRAEAAASRRDSSVRSSVTDRSDDARSLRL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtggtacatccggcatacgtgcagggcactctggacaccctcctgagcgccgacggctcc
gtcgatccggcggcgctgtccctgcgggacacgacgttcgtggtcctcgacctggagacg
acgggcggcgcccccgacggcgggggcatcaccgagatcggggccgtcaaggtgcgcggc
ggcgaggagctcggcgtcttcggcaccctggtcaacccgggtgagcgcatcccgccgttc
atcaccgtgctgaccggcatcaccgaggcgatgctggccccggcgccgccgatcgaggtc
gtgctgccgagcctgctggagttcctgcgcggggcggtcctggtcgcccacaacgcgccg
tacgacgtcggtttcctcaaggcggcctgtgcccggcacggataccagtggccgcaggtg
cgggtgctggacaccgcggcgctggcccggcgggcgctgacccgcgacgaggtgcccaac
cgcaagctgggcacgctcgcgcagttcttccgggccgccgtgcagcccacgcaccgggcg
ctcgacgacgcgaaggccacggtcgacgtgctgcacggcctgatcgagcggctgggcagc
tacaaggtgcacacgctgggtgacgcggtggagttcgccaaggcggtcaccccggcgcag
cgccgcaagcggcatctcgccgacgacctgccgcacgccccgggcgtctacgtgttccgg
gccgccgacgaccggccgctctacgtgggcacgtcggtcgacatcgccacccgggtccgc
agctacttcaccgcgagcgagaagcgcgcccgcatgtccgagatgatcgccgccgccacc
cgggtggaggccgtggagtgcgcccattcgctggaggcggaggtgcgtgagctgcggctc
atcgctgcgcacgcgccgccgtacaaccgccggtcgaagtatccggagcgcgtcgtctgg
ctgaaactgaccacggaggcatacccgcggctctcggtggtccgccagctcgccgacgac
ggcgcggcctatctggggccgttctcgtcgcggcgcaccgccgagctggccgcggcgggg
gtctacgacgccctgccggtgcgccagtgcacgcacaagctctccccgcgcacggtcacg
ccggcctgcgcgctggccgagctcgggcggtgcccggcaccctgcgagcacaagatctcc
gccgaggagtacgcggcgagagccgcgctgccctttcgcacggcgacccacggcgacccg
gagcccctggtcgaggcgcttctcgcgaggatcgaggggctgtcggagcggcagcgttac
gaggaggcggcggtcatccggtcgcggctcatcgcgctgctgcgcgccaccgtccgcatg
cagcggctgggggcgctgacccggctcggcgagctggtggcggcgcggcgcaacgacgcg
tacggatgggagatcgtcgtggtccggcacggccgcctggcggccgcggcgacgtcaccg
ccgcgcctgcatccccgcccgaccctggatctcgcgcgggcgacggccgagacggtcctt
ccggggccgggaccggtcccggcggcctcggccgaggagacggagcgcattctcgcgtgg
ctcgagcgtccggacacccggctggtggaaacttccggggactgggtgtcacccgcgcgt
ggcgcagcgcggttcactaggcttctcaccagggcggaggccgccgcgtcgagaagagac
tcctccgttcgctcatcggtaactgaccgttcggacgacgctcgctcgcttaggctgtag
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