Couchioplanes caeruleus: COUCH_34255
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Entry
COUCH_34255 CDS
T08133
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaz03016
]
COUCH_34255
Enzymes [BR:
ccaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
COUCH_34255
Transfer RNA biogenesis [BR:
ccaz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
COUCH_34255
Prokaryotic type
COUCH_34255
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UQU63986
LinkDB
All DBs
Position
7428259..7429188
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AA seq
309 aa
AA seq
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MRELTILGSASQVPTRHRNHNGYHLRWDDEVILFDPGEGTQRQMLMAGLAVTPLRRICIT
HFHGDHALGLPGVIQRISLDKVPHPVHVHYPAGGHAYFDRLRHATSFYDVADLVPTPVGP
GFSAETPAGTLTALPLRHSIETYGYRLAEPDGRRMLPALLDAYGIRGPAVGELQRTGRAG
TVTLEDVSAPRPGQRFAFVMDTGLCDSVFTLAEGADLLVIESTFLAEDAAMAAQVGHLTA
GQAASVARQSGVRTLLLTHFSQRYADSTRFLDEARAEFDGDIVIAEDLMRVPIPPRIGSS
HERAPAAGR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagctgacgatcctgggcagcgccagccaggtgcccacccgccaccgcaaccac
aacggctaccacctgcgctgggacgacgaggtgatcctcttcgaccccggcgagggcacc
cagcgccagatgctcatggccgggctcgccgtgacgccgctgcggcgcatctgcatcacc
cacttccacggcgaccacgcgctcgggctgcccggcgtcatccagcggatctcgctcgac
aaggtgccgcacccggtccacgtgcactacccggccggcggccacgcgtacttcgaccgg
ctccggcacgccacgagcttctacgacgtcgccgacctcgtgcccacgccggtcggcccc
ggcttctcggcggagaccccggccggaacgctcaccgcgctgccgctgcggcattcgatc
gagacgtacgggtaccggctcgccgaaccggacggccgccgcatgctacccgcgctgctc
gacgcgtacgggatccgcgggccggccgtcggcgagctgcaacgcaccggccgggccggc
accgtcaccctcgaggacgtcagcgcgccgcggccgggccagcggttcgccttcgtgatg
gacaccggcctgtgcgacagcgtgttcaccctcgccgagggcgccgacctgctggtcatc
gagtcgacgttcctggccgaggacgcggcgatggccgcccaggtcggccacctgacggcc
ggccaggccgcgtcggtggcccggcagtcgggggtacgcacgctgctgctcacccacttc
tcccagcggtacgccgacagcacccgcttcctcgacgaggcgcgcgcggagttcgacggc
gacatcgtgatcgccgaggacctgatgcgggtcccgattcctccgcggataggttcgtcg
catgagcgtgctcctgcggccggccggtga
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