Couchioplanes caeruleus: COUCH_34705
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Entry
COUCH_34705 CDS
T08133
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz03420
Nucleotide excision repair
ccaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
COUCH_34705 (pcrA)
03430 Mismatch repair
COUCH_34705 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_34705 (pcrA)
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COUCH_34705 (pcrA)
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
COUCH_34705 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
COUCH_34705 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UQU64071
LinkDB
All DBs
Position
complement(7527085..7529508)
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AA seq
807 aa
AA seq
DB search
MRVLPENSQPLFAVPPVQQEPPRRPAARRLDPESLLTGLNGPQRDAVTHAGSPLLIVAGA
GSGKTRVLTHRIAYLLAERDVHPGEIIAITFTNKAAGEMKERVAALVGPRARLMWVSTFH
SACVRILRAEHEHAGLKSTFSIYDADDSRRLMQLVARELDLDPKRYTARGLAAQVSNLKN
ELVDPADFKEKAKGPNERAVAEAYELYQRRLLEAHALDFDDIIMATVHLFQSHPHVAEAY
RRRFRHVLVDEYQDTNHAQYTLVRELVGPSGGEVPPAELCVVGDADQSIYAFRGATIRNI
LEFERDYPDARTILLEQNYRSTQTILSAANAVIDRNTSRKPKRLWSDQGAGEQIVGYVAD
TEHAEADWVAREIDRLCDNHEVRPGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFY
ERKEVRDALAYLRAVVNDDDTVSIRRVLNTPKRGIGDRAEACIEALSTRDRLSFGQALRR
AKDAPGISTRAVNSITDFVQLLDDLRELSRTAPPEEVLESVLQRSGLLSELEESLDPQDQ
GRVENLQELVSVAREYTERVEAQAEEDDDTQAATLAGFLEQVALVADADQIPSDDPDHQG
VVTLMTLHTAKGLEFPVVFLTGLEDGVFPHMRALGDNTELEEERRLAYVGITRARQRLYL
SRAVTRSAWGQPQYNPPSRFTDELPSELVRWERTAGSYTSWSGTGGGVGGRGGDHGRDYG
RGGGFAGGTPKAQRLAERLGVDASKLTTASEMKQAPKVAAGDRVNHQRYGLGRVVTVEGH
GPGARAQIDFGDQVMWLVLRHAPIEKI
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtccttccggaaaactcccagcccctgttcgcggtgccgccggtccagcaggag
ccgccccggcggcccgccgcccggcgcctcgaccccgagtcgctgctgaccggcctcaac
ggcccgcagcgcgacgcggtgacccacgccgggtcgccgctgctcatcgtggccggcgcg
ggttcgggcaagacccgggtgctgacccaccggatcgcctacctgctggccgagcgcgac
gtgcatccgggcgagatcatcgcgatcacgttcaccaacaaggcggcgggggagatgaag
gagcgggtcgccgcgctcgtcggcccccgcgcccggctgatgtgggtttcgaccttccac
tcggcctgtgtccggatcctccgcgccgaacacgagcacgccggcctgaagagcacgttc
tccatctacgacgccgacgactcccggcggctgatgcagctcgtcgcccgcgagctcgac
ctggacccgaagcgctacaccgcacgtgggctggccgcgcaggtctccaacctcaagaac
gagctcgtcgaccccgccgacttcaaggagaaggccaagggtcccaacgagcgtgccgtc
gcggaggcgtacgagctgtatcagcgccgtctgctcgaggcgcacgcgctggacttcgac
gacatcatcatggcgaccgtgcacctgttccagtcgcacccgcacgtcgctgaggcgtac
cggcgccggttccgccacgtgctcgtcgacgaataccaggacaccaaccacgcgcagtac
acgctggtccgcgagctcgtcggcccgtccggcggcgaggtgcccccggccgagctgtgc
gtggtgggcgacgccgaccagtccatctacgcgttccgcggcgcgaccatccgcaacatc
ctcgagttcgaacgcgactacccggacgcccgcacgatcctgctcgagcagaactaccgc
tccacccagacgatcctctccgcggccaacgccgtcatcgaccgcaacaccagccgcaag
cccaagcggctgtggagcgaccagggcgccggcgagcagatcgtcggctacgtcgccgac
accgagcacgccgaggccgactgggtcgcccgcgagatcgaccggctctgcgacaaccac
gaggtgcgtccgggagacgtcgcggtcttctaccgtacgaacgcccagtcgcgtgtcttc
gaagaggtgttcatccgcgtcgggctgccgtacaaggtggtcggtggcgtgcgcttctac
gagcgcaaggaggtgcgcgacgcgctcgcgtacctgcgcgccgtggtcaacgacgacgac
accgtgagcatccgccgggtgctcaacaccccgaagcgaggcatcggcgaccgtgccgag
gcctgcatcgaggcactgtccacacgcgaccgcctctccttcggccaggccctgcgccgc
gcaaaggacgccccgggcatctccacccgcgcggtgaacagcatcaccgacttcgtccag
ctcctcgacgacctgcgcgagctctcccgcaccgcgccgcccgaggaggtcctggagtcg
gtgctgcagcgctccggcctgctgtccgagctggaggagagcctcgacccgcaggaccag
ggccgggtcgagaacctgcaggagctcgtcagcgtcgcccgcgagtacaccgaacgcgtc
gaggcgcaggcggaggaggacgacgacacccaggccgcgacgctggccggcttcctcgag
caggtcgccctcgtcgcggacgccgaccagatccccagcgacgaccccgaccaccagggc
gtggtcacgctcatgacgctgcacaccgcgaagggcctcgagttcccggtggtcttcctg
accggcctggaggacggcgtcttcccgcacatgcgcgcgctcggcgacaacaccgagctg
gaggaggagcgccggttggcgtacgtgggcatcacccgcgcccgccagcggctctacctg
tcccgcgcggtcacccgttccgcgtgggggcagccgcagtacaacccgccgtcgcggttc
accgacgagctgccgtcggagctggtgcgctgggagcgtacggccggctcgtacacgtca
tggtccggtaccggcggcggcgtgggcggtcgcggcggggaccacggccgcgactacggt
cgcggcggcggcttcgccgggggtacgcccaaggcgcagcggctggccgaacggctcggc
gtggacgccagcaagctcaccaccgccagcgagatgaagcaggcccccaaggtcgcggcg
ggcgaccgcgtcaaccatcagcggtacggcctcggccgcgtcgtgacggtggagggccac
gggccgggggcgcgggcgcagatcgacttcggcgaccaggtgatgtggctggtgctgcgg
cacgcgcccatcgagaagatctag
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