Couchioplanes caeruleus: COUCH_36590
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Entry
COUCH_36590 CDS
T08133
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaz03021
]
COUCH_36590
Transcription machinery [BR:
ccaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COUCH_36590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_10
DUF134
GerE
MarR
DUF7343
HTH_3
HTH_23
HTH_31
HTH_24
Sigma70_ECF
MarR_2
HTH_Tnp_4
HTH_37
Motif
Other DBs
NCBI-ProteinID:
UQU64415
LinkDB
All DBs
Position
7920346..7921152
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AA seq
268 aa
AA seq
DB search
MTVTQSTATHASTRISEAPADSAADLLNAMAAMPAGHPSRALLRDRAIEAWLPLARHLAH
RYSGRGEPTDDLVQTATVGLIKAVDKFDPERGVDFAGYAIPTIIGEIKRHFRDRTWSVRV
PRRLQELRLAITEANATLTHTLGRSPQVADIAVHLGVTEEDVLEGLEGARAYNATSLSTP
ISADGTTELGDTLGGEDHEYELAETRVALGPALASLDEREQKILTLRFYGNLTQSQIAEQ
IGISQMHVSRLLTKALTKLRTQLAAETL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgactgttacccagtcgaccgcgactcacgcatcgacccggatcagcgaggcgcccgcg
gacagcgccgccgatctgctcaacgcgatggccgcgatgccggccggtcacccctcccgc
gccctgctgcgggaccgggcgatcgaggcctggctgccgctggcccgccacctcgcgcac
cgctactccggccgcggcgagcccaccgacgacctcgtgcagaccgccaccgtcggcctg
atcaaggccgtcgacaagttcgaccccgaacgcggcgtcgacttcgccggctacgccatc
cccaccatcatcggcgagatcaagcgccacttccgcgaccgcacctggtccgtgcgcgtg
ccgcgccgcctgcaggaactgcgcctggccatcaccgaggccaacgccaccctcacccac
accctgggccgctccccccaggtcgccgacatcgccgtacacctcggcgtcaccgaggaa
gacgtcctggaaggcctcgaaggcgcccgcgcctacaacgccaccagcctgtccaccccg
atcagcgccgacggcaccaccgaactcggcgacaccctcggcggcgaggaccacgaatac
gaactcgccgagacccgcgtcgccctcggccccgccctggccagcctcgacgaacgcgag
cagaagatcctcaccctgcgcttctacggcaacctcacccagtcgcagatcgccgagcag
atcggcatctcccagatgcacgtcagccgcctgctcaccaaggcgctgaccaagctgcgc
acccagctcgccgccgagaccctctga
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integrated database retrieval system
