Couchioplanes caeruleus: COUCH_37490
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Entry
COUCH_37490 CDS
T08133
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ccaz
Couchioplanes caeruleus
Pathway
ccaz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COUCH_37490
09124 Replication and repair
03420 Nucleotide excision repair
COUCH_37490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaz03021
]
COUCH_37490
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_37490
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COUCH_37490
Transcription machinery [BR:
ccaz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
COUCH_37490
DNA repair and recombination proteins [BR:
ccaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
COUCH_37490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
UQU64581
LinkDB
All DBs
Position
8151528..8153192
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AA seq
554 aa
AA seq
DB search
MSSGGPLIVQSDKTLLLEVDHPDAQACRMAIAPFAELERSPEHVHTYRLTPLGLWNARAA
GHDAEGVVDALIKFSRYPVPHALLVDVAETMDRYGRLQLANDPTHGLVLRGLDRIVLVEV
AKSKKLAGMLGARIDDETIVVHPSERGRLKQALLKLGWPAEDLAGYVDGEAHEIALAEDG
WTLRSYQQEAVDGFWAGGSGVVVLPCGAGKTLVGAAAMATAKATTLILVTNTVAGRQWKR
ELIARTSLTEEEIGEYSGERKEIRPVTIATYQVLTSRKGGAFTHLDLFGARDWGLVIYDE
VHLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIA
PAECVEVRVTLTDAERMAYAVTDAEERYRVAATARTKLPVVRALVNKHAGEQTLVIGGYI
DQLHELGEYLDAPIVQGSTTNKERERLFDEFRAGALRTLVISKVGNFSIDLPEAAVAIQV
SGTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGYAYTIV
DADDVLGPPLPQVD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcggcggacccctgatcgtgcagtccgacaagaccctgttgctggaggtcgac
caccccgatgcccaggcgtgccggatggcgatcgctccgttcgccgagctggagcgctcg
cccgagcacgtgcacacctaccggttgacgccgctcgggctgtggaacgcgcgtgccgcc
ggccacgacgccgagggtgtggtcgacgccctgatcaagttctcccgctatccggtgccg
cacgcgctgctggtcgacgtggcggagaccatggaccggtacggccgcctccagctggcc
aacgacccgacgcacgggctcgtcctgcgcgggctggacaggatcgtgctggtcgaggtg
gcgaagagcaagaagctggccggcatgctgggcgcccgcatcgacgacgagacgatcgtg
gtgcacccgtccgagcggggccggctcaagcaggcgctgctgaagctcggctggcccgcc
gaggacctcgccgggtacgtggacggcgaggcgcacgagatcgctctggccgaggacggg
tggacgctgcggtcgtaccagcaggaggcggtggacggtttctgggcgggcggctcgggc
gtggtggtgctgccctgcggcgccggcaagacgctggtcggcgcggccgcgatggccacc
gcgaaggcgaccacgctgatcctggtcaccaacacggtcgcgggccggcagtggaagcgg
gaactgatcgcccgcacgtcgctgaccgaggaggagatcggcgagtactcgggcgagcgc
aaggagatccgcccggtcaccatcgccacgtaccaggtgctcacctcccgcaagggcggc
gcgttcacccacctcgacctgttcggcgcccgcgactggggcctggtcatctacgacgag
gtgcacctgctgccggcgccgatcttccgcttcacggccgacctgcaggcccgccgccgc
ctcggcctgaccgcgacgctggtgcgcgaggacggccgcgagggcgacgtcttctcgctg
atcggaccgaagcgctacgacgcgccctggaaggacatcgaggcccagggctggatcgcc
ccggccgagtgcgtcgaggtccgggtcacgctgacggacgccgagcggatggcgtacgcg
gtgaccgacgccgaggagcgctaccgggtggcggccacggctcgcaccaagctgcccgtg
gtgcgcgccctggtgaacaagcacgcgggtgagcagacgctggtgatcggcgggtacatc
gaccagctgcacgagctcggcgagtacctcgacgccccgatcgtgcagggttccaccacc
aacaaggagcgcgagcggctcttcgacgagttccgcgcgggcgcgctgcggacgctcgtc
atctcgaaggtcggcaacttcagcatcgacctgcctgaggccgccgtggcgatccaggtg
tccggcacgttcggctcgcgccaggaggaggcccagcgcctcggccgcgtgctgcgcccc
aaggcggacggccgccaggcgcacttctacaccgtggtgtcacgcgacacgatcgacacc
gagtacgcggcccaccgccagcggttcctggcggagcaggggtacgcgtacacgatcgtc
gacgccgacgacgtgctcggcccgcccctgccgcaggtggactga
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