Couchioplanes caeruleus: COUCH_37660
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Entry
COUCH_37660 CDS
T08133
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaz03032
]
COUCH_37660 (topA)
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_37660 (topA)
Enzymes [BR:
ccaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
COUCH_37660 (topA)
DNA replication proteins [BR:
ccaz03032
]
Prokaryotic type
DNA Topoisomerases
COUCH_37660 (topA)
DNA repair and recombination proteins [BR:
ccaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
COUCH_37660 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
MarR_2
Toprim_2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
UQU64610
LinkDB
All DBs
Position
complement(8183388..8186216)
Genome browser
AA seq
942 aa
AA seq
DB search
MPSNARTTRLVIVESPSKAKTIAGYLGPDYFVEASFGHVRDLPKNADEVPEKYKGESWAR
LGVDVDNGFHPLYVVSSDRKQQIAKLKQLAKEVDEIFLATDEDREGEAIAWHLVETIKPK
VPVKRMVFHEITRPAIQAAVANPREIDKDLVDAQEARRILDRLYGYEVSPVLWKKVMPKL
SAGRVQSVATRIVVERERQRMAFRTAEYWDINAQLAVQGKVEGPRNFSATLIALNGDRIA
TGKDFEPTTGRIKPGASVVHLDGDGARGLAARLEDRPFQVTRVEEKPYRRRPYAPFITST
LQQEAARKLRMSSAQTMRVAQRLYENGYITYMRTDSVNLSETAIAAARRQIAELYGERSV
PPEPRRYTGKVKNAQEAHEAIRPAGDTFRAPGELAKELSGDEFRLYELIWRRTVASQMTD
AVGNSISVRIRAVSTAQEEADFAATGKTITDPGFLRAYVESSDDENAEAEDAERRLPNLV
KDQPLTAEELAAVGHHTSPPARYTEASLVKALEELGIGRPSTYASIMQTIQDRGYVEKRG
QALIPTFIAFAVIGLMEKHYPRLVDYNFTAAMENDLDGIAGGDHASLDFLSAFYFGSQNA
DPEDSIAQAGGLRKLVTDNLSAIDARSINSIPLFDDEEGRLIVVRVGRYGPYLQRQLPEA
TEESPNDRVSIPDGVAPDELTPEKVRELFLGGGGEKSLGEDPSTGEPVVLKSGRFGPYVE
SGERRSSLFRTQSPETLTLEQAVQLLTLPRVVGKDPEGAEIVAKNGKFGPYVQRGTDSRS
LQREDELFTITLDEALALLAAPKTRQRGAAKPPLRELGPDPATQKPMVIKEGRFGPYVTD
GEFNASLRRGQTPEELTVEQASEMLAEKRAKGPAPKKAAKRAPAKKAADGAEPAKKAATK
KATAKKAPAKKATARKATNAAPAAKKAAPKKAAPAKATAAAD
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagtaacgccaggacgacccgtctggtcatcgtcgagtccccgtcgaaggccaag
acgatcgccggttacctggggcccgactatttcgtcgaggcctccttcggccatgtccgt
gacctgccgaagaacgccgacgaggtgcccgagaagtacaagggcgagtcctgggcgcgg
ctcggcgtcgacgtcgacaacggcttccacccgctctacgtcgtctcctccgaccgcaag
cagcagatcgcgaagctgaagcagctggccaaggaggtcgacgagatcttcctcgccacc
gatgaggaccgcgagggcgaggccatcgcgtggcacctggtcgagacgatcaagccgaag
gtcccggtcaagcggatggtcttccacgagatcacccggccggcgatccaggcggcggtc
gccaacccgcgcgagatcgacaaggacctggtcgacgcccaggaggcgcggcgcatcctc
gaccggctgtacggctacgaggtcagcccggtgctgtggaagaaggtcatgccgaagctg
tcggcgggccgggtccagtccgtggcgacccgcatcgtggtcgagcgcgagcgccagcgc
atggccttccgcacggccgagtactgggacatcaacgcccagctggccgtgcagggcaag
gtcgaggggccgcgcaacttctcggcgacgctgatcgcgctcaacggcgaccgcatcgcc
accggcaaggacttcgagcccaccaccgggcggatcaagcccggcgcgtcggtcgtgcac
ctcgacggcgacggcgcccgcgggctcgccgcccggctcgaggaccgcccgttccaggtc
acccgggtcgaggagaagccgtaccggcgccggccgtacgcgcccttcatcacctcgacg
ctgcagcaggaggccgcgcgcaagctgcgcatgtcctcggcgcagaccatgcgggtggcg
cagcggctgtacgagaacggttacatcacctacatgcgtaccgactcggtgaacctgtcg
gagacggccatcgcggccgcccgccggcagatcgccgagctgtacggcgagcgcagcgtc
ccgccggagccgcgccgctacaccggcaaggtcaagaacgcccaggaggcgcacgaggcg
atccgccccgccggcgacaccttccgggcgccgggcgagctggccaaggagctctccggc
gacgagttccggctgtacgagctgatctggcgccgtacggtcgcctcgcagatgaccgac
gcggtcggcaactcgatctccgtgcgcatccgggcggtctccaccgctcaggaggaggcg
gacttcgccgcgaccggcaagacgatcaccgacccgggcttcctgcgcgcctacgtcgag
tcgtccgacgacgagaacgccgaggccgaggacgccgagcgccgcctgcccaacctcgtc
aaggaccagccgctgaccgccgaggagctcgccgcggtcggccaccacaccagcccgccg
gcgcgctacaccgaggcgtcgctggtcaaggcgctggaggagctgggcatcggccgcccg
tcgacgtacgcgtcgatcatgcagacgatccaggaccgcgggtacgtggagaagcgcggc
caggcgctgatcccgacgttcatcgcgttcgccgtgatcgggctgatggagaagcactat
ccgcggctggtcgactacaacttcaccgccgcgatggagaacgacctcgacggcatcgcc
gggggcgaccacgcctcgctggacttcctcagcgcgttctacttcggcagccagaacgcc
gacccggaagactcgatcgcccaggcgggcggcctgcgcaagctggtcaccgacaacctc
agcgccatcgacgcgcggtcgatcaactcgatcccgctcttcgacgacgaggagggccgg
ctcatcgtcgtgcgggtcggccggtacgggccgtacctgcagcgtcagctcccggaggcg
accgaggagtcgccgaacgaccgggtctccatcccggacggtgtcgcgcccgatgagctg
acccccgagaaggtcagggagctgttcctcggcggcggtggggagaagagcctcggcgag
gacccgtcgaccggcgagccggtggtgctcaagtccggccgcttcggcccgtacgtggag
agcggggagcggcggtcgtcgctgttccgcacccagtcgccggagacgctcacgctggag
caggcggtgcagctgctcaccctgccgagggtcgtcggcaaggaccccgagggtgcggag
atcgtcgccaagaacggcaagttcggcccgtacgtgcagcgcggcaccgactcgcggtcc
ctgcagcgcgaggacgaactcttcacgatcacgctggacgaggcgctggccctgctggcc
gccccgaagacccgccagcgcggcgcggccaagccgccgctgcgtgagctcggccccgac
ccggccacccagaagcccatggtgatcaaagagggccggttcggcccgtacgtgaccgac
ggcgagttcaacgcgtcgctgcggcgcgggcagacgccggaggagctgaccgtcgagcag
gcctcggagatgctcgccgagaagcgcgcgaagggtccggcgccgaagaaggccgcgaag
agggcgccggccaagaaggccgccgacggtgccgagcccgcgaagaaggccgccaccaag
aaggccaccgcgaagaaggcgccggccaagaaggcgaccgcccgcaaggcgaccaatgcc
gcgccggccgccaagaaggcagcgccgaagaaggcagcccccgcgaaggccacggccgcc
gccgactga
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