Clostridium cellulovorans: Clocel_0013
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Entry
Clocel_0013 CDS
T01294
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Clocel_0013
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccb01007
]
Clocel_0013
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccb03016
]
Clocel_0013
Enzymes [BR:
ccb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Clocel_0013
Amino acid related enzymes [BR:
ccb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Clocel_0013
Transfer RNA biogenesis [BR:
ccb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Clocel_0013
Prokaryotic type
Clocel_0013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NPV_P10
Laminin_I
Big_11
DUF7307
COG4_N
Motif
Other DBs
NCBI-ProteinID:
ADL49804
UniProt:
D9SML9
LinkDB
All DBs
Position
21223..22503
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AA seq
426 aa
AA seq
DB search
MLDLKRIRSNKDEIKAALSNRGEDFDLTVIDKVVELDESRRAILVEVENKKNQRNTESAL
VPKLKKAGEDASEVLQRMKSLSDEIKELDDKVRAIDEEIEYIMLRIPNIPNPLVPDGATD
EDNLEIKRWGEPRKFENEPKAHWDLGVDLKILDFERAGKVTGSRFTFYRGLGARLERALI
SYFLDTHVDINGYTEIMPPLMANRNSMKGTGQLPKFEEDAFTIQNNGYFLIPTAEVPVTN
YYRDEILVGEELPIKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKQEQSYEE
LDKLVKDAESILEGLGLPYRKVRICKGDLGFTAALKYDLEVWMPSYNKYVEISSCSNFED
FQARRANIKYREDAKAKPQFVHTLNGSGLAVGRTFAAILENYQNEDGSVTIPEVLRKYMG
GVEVIK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcttaaaagaataagaagcaataaagatgagattaaagcagctttaagcaac
agaggtgaagattttgatcttactgttatagataaggtagttgagcttgatgagtcaaga
agagcaatcttagtagaagtagaaaacaaaaagaaccaaagaaatacagaatcagcatta
gtaccaaagctaaaaaaagctggcgaagatgcttctgaagtgcttcaaagaatgaaatct
ctatcagacgaaattaaggaattagatgacaaagttagagcaatagatgaagaaatagag
tacataatgcttagaattccaaacatacctaatccattagttccagatggggcaacagat
gaggataatcttgaaattaaaagatggggagaaccaagaaaatttgaaaatgagccaaaa
gcgcattgggatctaggtgtggatctaaaaatattagattttgaaagagctgggaaggtt
actggttcaagatttactttttatagaggtcttggtgctagattagaaagagcactaatc
agctatttcttagatacacatgttgatataaatgggtatacagaaattatgcctccatta
atggctaatagaaatagtatgaaaggtacaggacaacttcctaagtttgaagaagatgct
tttacaatacaaaataacggatacttcttaattcctacagcagaggtacctgtaactaat
tattatagagatgaaattttagttggtgaagaattacctataaagcatgtagcttattca
gcttgttttagatctgaggctggttcagctggaagagatactagaggacttgtaagacag
catcaatttaataaagttgaacttgttaagtttacaaaacaagaacaaagttatgaagaa
ttagataaactagttaaagacgcagaaagtatactagaaggacttggattaccatataga
aaggtaagaatatgcaagggtgatttaggatttacagcggctttaaaatatgatttggaa
gtatggatgccaagttataataaatatgtagagatatcaagttgttcaaattttgaagat
ttccaagctagaagagcaaacataaaatatagagaagatgcaaaagctaaaccacaattt
gttcacacattaaatggatctggtcttgcagtaggaagaacttttgctgctattcttgaa
aattatcaaaatgaagatggcagtgtaacaattccagaagttttaagaaaatacatgggt
ggagtagaagttataaaatag
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