Clostridium cellulovorans: Clocel_0143
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Entry
Clocel_0143 CDS
T01294
Name
(GenBank) ABC-type bacteriocin transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
ccb
Clostridium cellulovorans
Pathway
ccb02010
ABC transporters
ccb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Clocel_0143
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clocel_0143
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccb01002
]
Clocel_0143
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccb02000
]
Clocel_0143
Peptidases and inhibitors [BR:
ccb01002
]
Cysteine peptidases
Family C39
Clocel_0143
Transporters [BR:
ccb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Clocel_0143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_22
AAA_24
nSTAND3
AAA_18
ABC_ATPase
TsaE
AAA_7
AAA
Sigma54_activat
AAA_29
G-alpha
AAA_25
MTS_N
NB-ARC
Roc
AAA_5
AAA_16
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
ADL49932
UniProt:
D9SNR1
LinkDB
All DBs
Position
220739..222970
Genome browser
AA seq
743 aa
AA seq
DB search
MSDLLKKYHCVKQHDIKDCGAACIATIAKQYGLKIPISKIRELAGTDMKGTSAFGVIKAA
EALGFTAKGVKASKPEDIFSEFPKPAIAHVIIDESLLHYVVIHSVTKKEILVADPAEGIV
KYTPEKFFKIWTGVLIFMTPAVAFKTGDETKGLFQRFWGLIKVQKNLLTNIFISSMLITL
LGIAGSFYFKFLIDDILPNNLGNSLLVISVAMIGLIIFRIITEFFRSLLLMHMSQNIDIP
LLLGYYNHVIDLPMNFFGTRQVGEIISRFNDAGKIRDAISQTTLTIMIDTVMAIAGGIIL
YMQSPKLFWSCFIPIALYMVLVFAFKSSLEKVNRKVMEDNAELTSYLVEGIEGIETVKAY
NGERKVNLETEKRFIKLIKSVFKHGYVNNLQATLKNTVKGIFGIVVLWIGARLAMKGEIT
VGALISFNALLAYFIEPIERMIDLQPELQSAMVAADRLGEILDLEKERAQNENKKITPTT
LLGDIVLKDVDFRYGTRQLVLKNINMHIKKGEKVALVGESGSGKTTIAKLLMNFYGIEKG
ELTINDYNIKDISLDVLRDKVSYISQDSFFFSGTIMENMEFANCDATFEEIIEACKMTQI
HDFINDMPTRYETLLEEKGSNLSGGQRQRLAIARALLKKPEILIMDEATSNLDSITEKAI
EKTIEECTKNVTTVIIAHRLSTIMKCDKIYVMEKGEVIEEGTHKELLSKKGYYYRLWSGQ
TSDAEAEVASAVDPLSGGDSHEI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttactaaaaaaatatcattgcgtaaaacaacatgatataaaagattgtggg
gcagcttgtatagctactatagcaaaacaatatgggttaaagataccaatatctaagata
agagaattagcgggtacagatatgaaggggacctctgcttttggagttataaaggcagca
gaagcattagggttcactgctaaaggggtaaaagcatcaaagccagaggatattttttcc
gagtttccaaaaccagcgattgcacatgtaataattgatgaatctttattgcattatgta
gttatacatagtgttacaaaaaaagaaatattagtagcagatccagcggaaggtatagtt
aaatacactccagaaaagttctttaagatttggacaggcgtactgatttttatgacgcca
gctgttgcttttaaaacaggggatgagactaaaggattattccagagattttggggcttg
ataaaggtccagaaaaatcttttaacaaatatttttatatcgtctatgctaataacatta
ttgggtatagccggctctttctattttaaattcttgattgatgatattttgccaaacaac
ttaggtaatagcttactggttatatctgtagctatgattggactcattattttcaggata
ataactgaattctttagaagtttattgcttatgcatatgtcgcagaacatagatataccg
cttcttttgggatactacaaccatgtaatagatttacctatgaacttctttggtacaaga
caggttggagaaataatatcaagatttaacgatgcaggtaagatcagagatgccatatca
caaacaactttaactattatgattgatactgttatggctattgctggcggaataatttta
tatatgcagagtccaaaattattttggtcatgttttattccaattgcattatatatggtt
ttagtatttgcctttaagagttcccttgagaaggtaaatagaaaggttatggaggataat
gctgaattaacttcttacttagttgaaggtatagaaggaatagagactgttaaggcttac
aatggagaaagaaaagttaatttagaaactgagaaaagatttataaagcttataaagtcg
gtttttaagcatggctatgtaaacaatcttcaagcaactttgaaaaacactgtaaaaggt
atttttggcattgtggttttatggataggagctagactggctatgaagggtgagataaca
gtaggtgcgcttataagttttaatgcgttactagcttactttattgagccgattgaaaga
atgattgatttgcagcctgaattacaaagtgctatggttgcagctgatagattaggagaa
atcctagaccttgaaaaagaaagagcacaaaatgaaaataaaaagataacaccaactact
cttttaggtgatattgttttaaaagatgtagactttagatatggtacaaggcaattggtc
ttaaaaaatatcaatatgcacattaaaaaaggtgagaaggtagctttggtaggggaaagt
ggttctggaaagacgactatagcaaaacttcttatgaatttctatggcatagagaaaggt
gagcttacgataaacgattataacatcaaagatataagcttagatgttttaagagataag
gtgtcttatatttcccaggattccttcttcttctctggaactattatggaaaatatggag
tttgcaaattgtgatgctacctttgaagagattatcgaagcatgtaaaatgactcaaatt
catgattttattaatgatatgccaacgagatacgaaaccttgttagaggagaaaggtagc
aacctttcaggtggacaaagacagagattagctattgctagagcacttttgaaaaagcca
gagattcttataatggatgaggctacttcaaatctagattctataacagaaaaggctata
gaaaaaactatagaggaatgtactaaaaatgttacaacagtaataattgcacatagatta
agcactattatgaaatgtgacaagatatacgttatggaaaaaggtgaagttattgaagaa
ggaactcataaggagctgctaagtaaaaaaggttattattatagattgtggagtggacaa
acttctgatgctgaagctgaagttgcatctgcggtagatccattaagcggaggtgatagc
catgagatataa
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