Clostridium cellulovorans: Clocel_0656
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Entry
Clocel_0656 CDS
T01294
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Clocel_0656
09124 Replication and repair
03420 Nucleotide excision repair
Clocel_0656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccb03021
]
Clocel_0656
03036 Chromosome and associated proteins [BR:
ccb03036
]
Clocel_0656
03400 DNA repair and recombination proteins [BR:
ccb03400
]
Clocel_0656
Enzymes [BR:
ccb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Clocel_0656
Transcription machinery [BR:
ccb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Clocel_0656
Chromosome and associated proteins [BR:
ccb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Clocel_0656
DNA repair and recombination proteins [BR:
ccb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Clocel_0656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADL50427
UniProt:
D9SRR0
LinkDB
All DBs
Position
823190..825526
Genome browser
AA seq
778 aa
AA seq
DB search
MREIKISIRNLVEFIMRHGSIDNRYVGSVRAVEGTRAHQKIQRGYKDNYKAEFPLKYEIV
EEDIKIIVEGRADGILSEDDDFIIDEIKTTVRDLASIDEDFNPLHWAQAKCYGYIYCLQN
ELSEIYIQITYYNIETDETKFLRNKYTFDELKNFFFDLIDKYKEWAEIQKQWENLRDETI
KWLTFPFNEYRRGQRDFAVRVYKSITDGKKCFAQAPTGIGKTVSTLFPAIKALGEGHSSK
LFYLTAKTITREVAENTIEAMRNKGLKLKAVTITAKDKVCFMEESNCNPEYCPYANGYYD
RINEALKLILKEKGDYTREIIEKFAKDYQLCPFELALDLTLWSDAIVCDYNYVFDPKVYL
RRFFENKTTDFTFLIDEAHNLVDRGREMFSATLNKSDVMNLKKELKEKDKRLYKALNNIN
SYFVEKKKACEPEGIIIEKEEPLELYTFLRVFLERADEYLSENQDDSEELLKFYFDAYSF
MSIGDLYNEKYVTFTEKNYDDTRIKLYCVDPSELLQGAMKRGKASVIFSATLLPLPYFQD
ILGGNSEDYLVNLTSPFNIDNRLLLIADNVSTTYTKREESLDDIVDYIILTAKSKIGNYM
VFFPSYKYMEMVYESFLERETGLTSKIQGSSMTEEEKEEFLGAFKNDPEESYIGFCVLGG
HFSEGIDLTYDRLIGVIIVGVGMPQIGIDRDIIKDYFNEKEGTGFDYAYTYPGMIKVLQA
VGRCIRTEEDKGVIVLIDTRYGQRRYTQLFPAEWRNNNKVRSTEEAATLMKNFWDRIE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaattaagatatctataagaaatttagtagaatttattatgcgacatggtagc
attgataatagatatgttggcagtgttagagctgtggaaggtacaagggcacatcaaaaa
attcaaaggggctataaggataattataaggctgagtttcctttaaaatatgagattgtt
gaggaagatataaaaatcatagtagagggaagagctgacggaattttaagtgaagatgat
gattttataatcgatgaaataaaaactactgtaagagatttagctagtatagatgaagac
tttaatcctcttcattgggcccaggcaaagtgctacggatacatatattgcttgcaaaat
gaactgtcggaaatatatatacaaattacctattacaacatagaaaccgatgagactaaa
tttcttagaaacaaatatacctttgatgagcttaagaattttttctttgatttaatagat
aaatataaagagtgggcggaaattcaaaagcagtgggaaaatcttagggatgagactata
aagtggttaacttttccttttaatgaatatagaagagggcaaagagattttgcagtaagg
gtctataaaagtataactgatggtaagaagtgttttgctcaagcaccaactggaattggt
aagactgtatctactcttttcccagcaatcaaggcgttaggagaaggtcatagttcaaag
cttttttatcttacagcaaagacaataactagagaagtagcagagaatactatagaagct
atgagaaataagggtttaaagcttaaagctgtgactataactgctaaggataaggtatgt
tttatggaagagtccaattgtaatccagaatattgtccttatgcaaatggttattatgat
cgtataaatgaagctttaaagttaatattaaaagaaaagggtgattatacaagagaaatc
atcgagaaatttgctaaggattatcaattatgtccttttgaattggctttggatttaact
ttatggtctgatgcaattgtttgtgactacaattatgtttttgatccaaaggtttattta
agaaggttttttgaaaataagactacagattttacttttttaatagatgaggctcataac
ttagttgatagagggcgggaaatgttttctgccaccttaaataagagtgatgtaatgaat
cttaaaaaagagcttaaggaaaaagataaaagactttataaagctcttaataatataaat
agttactttgtggagaagaaaaaagcttgcgagccagaaggtattattatagagaaagaa
gagccactggaactttatactttccttagagttttcttagaaagggcagatgaatatcta
tcagaaaaccaagatgatagtgaagaattattaaagttttattttgatgcttatagtttt
atgtctattggggatttatataatgaaaagtatgtgacctttacagagaagaactatgat
gatacaagaataaaactttattgtgttgatccttctgaattattacaaggagctatgaaa
cgaggaaaagcttctgttattttttctgctaccttgttaccattaccatactttcaggat
atcttaggtggaaattcagaagattatttagtgaatttgacttctccttttaatatagat
aacaggttattgcttattgctgacaatgtatccacaacttatacaaaaagagaggaatct
ttggatgatattgttgattatataattcttacagctaaaagcaagataggaaattatatg
gttttctttccttcttataaatatatggagatggtatatgaaagctttttagaaagagag
actggcttaacttcaaaaattcaaggctctagtatgacggaagaggaaaaggaagaattt
cttggagcattcaaaaatgatccagaagaatcctatataggattttgtgttttaggtggt
catttttcagaagggatagatttaacttatgataggctcataggtgttataatagtcgga
gtaggtatgcctcagattggaattgatagggatattataaaggattattttaacgagaaa
gaaggaactggttttgattacgcatacacttaccctggaatgataaaggtacttcaagca
gttggtaggtgcattagaaccgaagaagataaaggtgtaatagtacttatagatacaagg
tatgggcaaagaaggtatacacagttattcccagcagagtggcgaaacaataataaggta
agaagcacagaggaagcagctactcttatgaagaatttttgggatagaattgaataa
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