Clostridium cellulovorans: Clocel_0909
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Entry
Clocel_0909 CDS
T01294
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb03030
DNA replication
ccb03430
Mismatch repair
ccb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Clocel_0909
03430 Mismatch repair
Clocel_0909
03440 Homologous recombination
Clocel_0909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccb03032
]
Clocel_0909
03400 DNA repair and recombination proteins [BR:
ccb03400
]
Clocel_0909
Enzymes [BR:
ccb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Clocel_0909
DNA replication proteins [BR:
ccb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Clocel_0909
DNA repair and recombination proteins [BR:
ccb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Clocel_0909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADL50679
UniProt:
D9ST63
LinkDB
All DBs
Position
1109205..1110125
Genome browser
AA seq
306 aa
AA seq
DB search
MNFIAIDFETANEKRNSPCSIGIVVVKNGEVVERIHHLIKPKEMRFMPINIGIHGIRPAM
VENEPEFHEVWAKIKHHFNESLVIAHNASFDISVLRKSAELYDIELPSFKYICTMRLAKN
FYRGIENAKLNTVNDFLGYEFKHHDALYDALACSNILLNISEELRCKDIDEISKLIGVTI
GAVDNDDYKPSKAEGRPIKISSRNYCPKKENIYERFEKDAFKDEVVVFTGRLCSMARDEA
MRLVRRLGGTAGSSVTKKTTILVTNTKDPKELRKEEMSTKLRKATDLSEKGQNIRFLNEE
DFLNIR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaattttatagctatagattttgaaacagcaaatgaaaaaagaaatagtccctgttct
attggtattgttgtggtgaagaatggagaggttgtagaaagaatacatcatttaatcaaa
cctaaggaaatgagatttatgcccattaatattggaattcatggcataagaccagccatg
gttgaaaatgaaccagaattccatgaagtatgggctaagattaagcatcattttaatgaa
agcttagtaatagctcataatgcctcttttgatatctcagttttaagaaaaagtgcagag
ctttatgatatagaattacctagttttaagtatatttgcaccatgaggctggctaaaaat
ttttatagaggaattgagaatgcaaaattaaatacagtgaatgactttttaggatatgag
tttaaacaccatgatgcattatatgatgcgcttgcttgtagcaacatattactgaatata
tcggaagaactcaggtgtaaggatattgatgaaatatctaaattgataggggtaactatt
ggagctgtagataatgatgactacaaaccatcgaaggcagaggggagacctattaaaata
tctagcagaaattattgccctaaaaaggaaaatatatatgaaagatttgagaaggatgct
tttaaagatgaagtagtagtatttactggaaggttatgctctatggctagagatgaagcc
atgagattagttaggagactagggggaactgcaggaagttctgttactaaaaagacaaca
atcctagtaactaatacgaaggatccaaaggagttacgtaaagaagaaatgagcactaag
cttagaaaagcaacagacttaagtgaaaaagggcaaaatataagattcttaaatgaagag
gactttctgaatatacggtaa
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