Clostridium cellulovorans: Clocel_1172
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Entry
Clocel_1172 CDS
T01294
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb00040
Pentose and glucuronate interconversions
ccb01100
Metabolic pathways
ccb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Clocel_1172
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clocel_1172
Enzymes [BR:
ccb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Clocel_1172
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ADL50928
UniProt:
D9SUM3
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Position
1416556..1417794
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AA seq
412 aa
AA seq
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MLKSKKILSTMIATLVLSGAIVGNVTTTQNVNAAVSGEKAIGYGANATGGGDTKNIFYVN
TKKELLAAISAKIKDAKGTVITDAPKIIVIQKDINLCSDSTGKEYIPGVSDPKTMPWKSG
SDMASDVIVRVKSNTTLIGKDGGVTLSGGGIKLGTGTNNVVIKNISFEDAYDFFPIWSSN
EWNTELDNMCVEGATNVWIDHCTFSDGKNPEKAKGCTDKNTPIHHDGLLDVKAGADNVSI
SHCLFKDHLKVDLLGSSDKAESKDGGKLHVTFYENYYTNTHERLPRVRFGHVHALNNYYE
ATGQDSIAYVFGMGLKSTLYSEGNIFNLNPTDMANNKTTVMRSMNTGTPTYYFQEAGSIL
NGNVYPTQVLGASKPAYDTTAKPGYSYVPKVVTVSNYKTIAQEIVNNAGAGK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagtaaaaagattttaagtactatgattgcgactcttgtgcttagtggcgca
atagttggaaacgttacgacaactcaaaatgtaaatgcagcagttagcggggagaaagct
attggttatggtgcaaatgctactggtggtggagatacaaagaatattttctatgtaaac
acaaagaaagaattattagctgcaatatcagctaagataaaagatgctaaaggaacagta
ataactgatgcaccaaaaataatagttatacaaaaggatattaatctttgtagtgattct
acaggtaaagaatatattccaggagtttcagacccaaaaactatgccatggaaaagtggt
tctgatatggctagcgatgttattgtaagagtaaaatcaaacacaacgcttataggtaaa
gatggtggtgtaacactatctggtggtggaataaaacttggtactggaacaaataatgtt
gtaattaagaatataagctttgaagatgcttacgacttcttcccaatatggagcagtaat
gaatggaacacagaacttgataatatgtgtgtagaaggggctacaaatgtttggatagat
cactgtactttttctgatggaaaaaatcctgaaaaagctaaaggctgtacagataaaaat
actccaatacaccatgatggattattagacgttaaagctggagcagataatgtatctata
tctcattgtctttttaaggatcatttaaaagttgatcttttaggatcttcagataaagca
gaaagtaaagatggtggaaagttacatgtaactttctatgaaaattattatacaaatact
catgaaagattaccaagagtaagatttggacatgttcatgctttaaataattattatgaa
gcaactggacaagattctattgcttatgtttttggaatgggattaaagagtacattatat
tcagaaggcaacatatttaatctaaatccaacagatatggctaataacaaaactactgta
atgagaagtatgaatacaggtacacctacatattacttccaagaagcaggaagtatctta
aatggtaatgtatacccaactcaagttcttggtgcaagcaagccagcatatgatacaact
gcaaaaccaggatatagttatgttccaaaagtagtaacagtaagcaactataaaactatt
gcgcaagaaattgttaataatgctggagcaggtaaataa
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