Entry |
|
Name |
(GenBank) Pectate lyase/Amb allergen
|
KO |
|
Organism |
ccb Clostridium cellulovorans
|
Pathway |
ccb00040 | Pentose and glucuronate interconversions |
|
Brite |
KEGG Orthology (KO) [BR:ccb00001]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Clocel_1172
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clocel_1172
Enzymes [BR:ccb01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Clocel_1172
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1416556..1417794
|
AA seq |
412 aa
MLKSKKILSTMIATLVLSGAIVGNVTTTQNVNAAVSGEKAIGYGANATGGGDTKNIFYVN
TKKELLAAISAKIKDAKGTVITDAPKIIVIQKDINLCSDSTGKEYIPGVSDPKTMPWKSG
SDMASDVIVRVKSNTTLIGKDGGVTLSGGGIKLGTGTNNVVIKNISFEDAYDFFPIWSSN
EWNTELDNMCVEGATNVWIDHCTFSDGKNPEKAKGCTDKNTPIHHDGLLDVKAGADNVSI
SHCLFKDHLKVDLLGSSDKAESKDGGKLHVTFYENYYTNTHERLPRVRFGHVHALNNYYE
ATGQDSIAYVFGMGLKSTLYSEGNIFNLNPTDMANNKTTVMRSMNTGTPTYYFQEAGSIL
NGNVYPTQVLGASKPAYDTTAKPGYSYVPKVVTVSNYKTIAQEIVNNAGAGK |
NT seq |
1239 nt +upstreamnt +downstreamnt
atgttaaaaagtaaaaagattttaagtactatgattgcgactcttgtgcttagtggcgca
atagttggaaacgttacgacaactcaaaatgtaaatgcagcagttagcggggagaaagct
attggttatggtgcaaatgctactggtggtggagatacaaagaatattttctatgtaaac
acaaagaaagaattattagctgcaatatcagctaagataaaagatgctaaaggaacagta
ataactgatgcaccaaaaataatagttatacaaaaggatattaatctttgtagtgattct
acaggtaaagaatatattccaggagtttcagacccaaaaactatgccatggaaaagtggt
tctgatatggctagcgatgttattgtaagagtaaaatcaaacacaacgcttataggtaaa
gatggtggtgtaacactatctggtggtggaataaaacttggtactggaacaaataatgtt
gtaattaagaatataagctttgaagatgcttacgacttcttcccaatatggagcagtaat
gaatggaacacagaacttgataatatgtgtgtagaaggggctacaaatgtttggatagat
cactgtactttttctgatggaaaaaatcctgaaaaagctaaaggctgtacagataaaaat
actccaatacaccatgatggattattagacgttaaagctggagcagataatgtatctata
tctcattgtctttttaaggatcatttaaaagttgatcttttaggatcttcagataaagca
gaaagtaaagatggtggaaagttacatgtaactttctatgaaaattattatacaaatact
catgaaagattaccaagagtaagatttggacatgttcatgctttaaataattattatgaa
gcaactggacaagattctattgcttatgtttttggaatgggattaaagagtacattatat
tcagaaggcaacatatttaatctaaatccaacagatatggctaataacaaaactactgta
atgagaagtatgaatacaggtacacctacatattacttccaagaagcaggaagtatctta
aatggtaatgtatacccaactcaagttcttggtgcaagcaagccagcatatgatacaact
gcaaaaccaggatatagttatgttccaaaagtagtaacagtaagcaactataaaactatt
gcgcaagaaattgttaataatgctggagcaggtaaataa |