Clostridium cellulovorans: Clocel_1772
Help
Entry
Clocel_1772 CDS
T01294
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccb
Clostridium cellulovorans
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccb03032
]
Clocel_1772
03400 DNA repair and recombination proteins [BR:
ccb03400
]
Clocel_1772
Enzymes [BR:
ccb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Clocel_1772
DNA replication proteins [BR:
ccb03032
]
Prokaryotic type
DNA Topoisomerases
Clocel_1772
DNA repair and recombination proteins [BR:
ccb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clocel_1772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
HypA
Toprim_4
Zn_ribbon_RPB9
TaqI_C
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ADL51516
UniProt:
D9SKM0
LinkDB
All DBs
Position
2144551..2146653
Genome browser
AA seq
700 aa
AA seq
DB search
MGTNLVIVESPAKAKTIRKYLGKNYVVEASMGHVRDLPKSQTGVDVENNYEPKYITIRGK
GELLDKLRKQAKKSEKIYLATDPDREGEAISWHLSKVLKLSETEKCRIEFNEITKTAIKA
AIKSPREINMNLVDAQQARRVLDRLVGYGISPILWRKVKWGLSAGRVQSATLRMICERDK
KIKEFIPKEYWTIEGIFNSTDDTKNSKEKLNLKLHNFKNEKIEIDTKEKADEILNIIKSG
NYTVSKVKKTERIKNPLPPFITSTLQQDAYRKLNFTTKRTMSIAQQLYEGIEIKGKGSVA
LITYMRTDSVRISDEAQKSALEFINTSYGTEYVPSEPRIYKGKKNIQDAHEAIRPTYIDI
TPDKIKGDVKDEIYKLYKLIWERFVASQMKSCVLDTVSVTVDNSGYNFKANGSTVKFDGF
MKIYSYGTEGDESLTTIPKVQEGEMLSCIQIDGLQHFTEPPARFSEASLVKTLEENGIGR
PSTYAPTIATLLSRKYIEREKKTLVPTELGIIVDNIMCEFFNQIVDEEFTANMEERLDDI
ELGDSDWRKIVNEFFTPVKAEIEKAEIELAKITIEDEVTDIQCEKCGRNMVIKHGKFGDF
LACPGYPECENTKPIVEEIDTPCPKCGSKIVVKKSKKGRKFFGCSTYPNCDYVSWYEPSS
KKCNQCGSIMLKKYNKTNGNYLECSNSDCKSKEIIQEETE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaaatttagtaatagttgaatcaccagctaaagcaaagactattcgaaagtat
ttaggaaagaattatgtagtagaagcatcgatgggtcatgttagagatttgccaaagagt
cagactggtgtggatgtagaaaataattatgagcctaaatatataaccataagaggaaaa
ggtgaacttctagataaactaagaaaacaagcgaaaaaaagcgaaaagatttatctagct
accgaccctgaccgtgagggagaagcgatatcttggcatttaagtaaggttttaaaactt
tcagaaacagaaaaatgcaggattgaatttaatgagattacaaaaactgcaataaaagca
gcgataaaaagtccaagagaaataaatatgaatttagtagatgctcaacaagcgaggaga
gtactagatcgattagttggttacggaataagccctattttatggagaaaagtcaagtgg
gggttaagtgcgggaagagttcaatctgctactttaagaatgatctgtgaaagagacaag
aaaataaaagagtttattccaaaagaatattggactattgaggggattttcaattcaaca
gatgatactaaaaatagtaaagaaaaattaaatttaaagcttcataactttaaaaatgag
aaaattgaaattgatacaaaggaaaaagctgatgagatattaaatattataaaaagcgga
aattatactgtttctaaagttaagaagactgaaagaattaaaaatccactgccaccattt
ataacaagtactcttcaacaggatgcatatagaaaacttaattttactacaaaacgaaca
atgtctattgctcaacaattatatgaaggtattgagataaaaggaaagggttctgttgct
ttgataacatatatgagaacagattcggtaagaatttctgatgaagcgcaaaaatcagca
cttgagtttataaatacatcttatggaactgagtatgttccaagcgaaccaagaatatat
aaggggaaaaagaatattcaagatgctcatgaagctataagaccaacttatatagatata
actccagataaaattaaaggagatgtaaaggatgaaatatataagctatataagttaata
tgggaaagatttgtagctagtcaaatgaagtcatgtgttttagataccgtttctgtaact
gttgataacagtggttacaattttaaggctaatggttctactgtaaagtttgatgggttc
atgaagatatatagttatggaacagaaggagacgagagtcttacaactattccaaaggtg
caggaaggtgaaatgctaagttgcattcagattgatggtcttcagcactttactgagcca
ccagcaaggttttcggaagcatcacttgtaaagacacttgaggaaaatggtataggaaga
ccaagtacatacgctcccacaatagcaaccttacttagtagaaagtatattgaaagagaa
aagaagacactagttcctacagaacttggaataattgttgataatataatgtgtgaattc
tttaatcaaattgttgatgaagaatttactgcaaacatggaagaacgattagatgatatt
gaacttggagatagtgattggcgaaagattgtaaatgaatttttcacaccagtaaaggct
gaaattgaaaaagctgaaattgagcttgctaaaataaccattgaagatgaagtcacagat
atccagtgtgaaaaatgtggaagaaatatggttattaaacatggtaagtttggagacttt
ttagcatgccctggttatccagagtgcgagaatacaaaaccaattgttgaggagattgat
actccttgtccaaaatgcggaagtaaaatagttgtgaaaaagagtaaaaaaggtagaaag
ttttttggttgcagcacttatcctaactgtgattatgttagttggtacgaaccttcttcg
aaaaaatgcaatcaatgtggctctattatgttaaaaaaatataacaaaactaatggaaat
tatttagaatgttctaatagtgattgtaaaagtaaagaaattatacaagaagagaccgaa
taa
DBGET
integrated database retrieval system
