Clostridium cellulovorans: Clocel_1872
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Entry
Clocel_1872 CDS
T01294
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clocel_1872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccb03400
]
Clocel_1872
Enzymes [BR:
ccb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clocel_1872
DNA repair and recombination proteins [BR:
ccb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clocel_1872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
SLFN-g3_helicase
Zn_ribbon_6
AAA_11
T2SSE
EcoEI_R_C
PIF1
zf-CHY
DUF1272
Phage_pRha
DUF5830
Motif
Other DBs
NCBI-ProteinID:
ADL51616
UniProt:
D9SLA0
LinkDB
All DBs
Position
2256456..2258657
Genome browser
AA seq
733 aa
AA seq
DB search
MASYAQVIINNESSMVDRPFTYKIPERLKDNLKIGHRIKIPFGKGNKKIDGFVFSLLDQY
ISNYEIKEIESIEDDFTAFEERDIPLIEEMRERYLCTYIQCIKVIVPAGVFEGLKLKKSK
TVYIKKTLEGKYKKEPYDRIYGIVKESQGIFTKSQLSKTYNISLSSINTLIKNGFIQELE
EVVDRFDQRNYEFYERKNLNDNQREVVETILHSDEKKFLIHGITGSGKTEIYMNLVEKTM
ELEKDSIILVPEIALTPQMVERFKGRFGNKIAVFHSKLSNGERFDEWMRVKNRKVQLAIG
ARSAIFLPFNNLSLIVIDEEHESSYKSDSDPKYHAREIGEILQKNQGVKLVLGSATPSVE
TYFKANSREYHLLTLTKRADKATLPVTEIVDMREELVRKNKSMFSGALLRAIDEALSKKE
QIILFLNRRGFSTFVSCRKCGFVFKCRNCDISLTYHHHNDTLSCHYCGSTEKTKKICPKC
GSSYVKYFGAGTEKIEENIKKYFPSAKTIRMDFDTTRKKDAYEEIYNSFKAGNADILIGT
QMIAKGLDFKNVTLVGVVAADISLNLPDFRSGERTFQLLTQVGGRAGRGEKSGKVIIQTY
TPESYSIIAASNHDYEGFYQEEINLRKTMNYPPFSKVFLINISSKDEALLIKISHSIGQE
VKEKLKDYEKIEILGPCPCTIGKVKENYRWQIILKGDIENKFAISIKNLCYEKIKNHKGD
IKISTDLNPLSLL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttatgcacaagttataattaataatgagtcgtccatggttgatagaccattc
acttataaaattcctgagagattgaaagataatctaaagattggccacagaattaaaatt
ccttttggaaaaggaaataaaaagattgatggattcgtattttccttattagaccaatat
attagtaattatgagataaaagaaattgaatcaatagaagatgattttactgcttttgaa
gaaagagatattcctttaattgaggaaatgagagaacgatatctttgtacctatattcaa
tgtataaaggtaatcgtacctgctggagtttttgagggtttaaaactaaaaaaatcaaag
acagtatatataaaaaaaactttagaaggaaaatataaaaaagagccttatgatagaata
tatggaatagttaaagaatcacaaggaatctttacaaagagtcaattaagtaaaacatat
aatatctctttatcatcgattaatactttaataaaaaacggatttattcaggaactagaa
gaagtggttgataggtttgatcaaaggaattatgaattctatgaaagaaaaaatttaaat
gataatcaaagagaagtagttgaaacaatacttcatagtgatgagaaaaaattcttgatt
catgggattacaggaagcggaaaaacagaaatatacatgaatttggtagaaaagaccatg
gaacttgagaaagatagtattattcttgttccagaaatcgcattaacaccgcaaatggtt
gagcgatttaaaggacgatttggtaataaaatagctgtttttcatagtaagctttctaat
ggagaaagatttgatgaatggatgagggtgaaaaacagaaaggtccaattagctattgga
gccagatcagcaatatttcttccatttaataatttatcactgatagtaattgatgaggag
catgaaagtagttataaatcagatagtgatcctaaatatcatgcaagggaaattggtgaa
attcttcagaaaaatcaaggagtaaaactagtcttaggttctgcaactcctagtgtagaa
acttattttaaggcaaactctagagaataccatctcttaactcttaccaaaagggcagat
aaagctacgttacctgtaacagaaattgtagatatgagagaagaattggttagaaaaaac
aaatctatgtttagtggagctcttttgagagctattgatgaagctttatcaaaaaaagaa
caaataattctatttttaaatagaagaggattttcaacttttgtatcttgtagaaaatgt
ggtttcgtatttaaatgtagaaattgtgatatttctttgacttatcatcaccataatgat
actttaagctgtcattattgtggctcaacagaaaaaactaaaaaaatatgtcctaaatgt
ggaagttcttacgtaaaatattttggtgcaggtacagaaaaaatagaagagaatataaaa
aaatactttcctagtgctaaaactataagaatggattttgataccacgagaaaaaaagat
gcttatgaagagatatacaatagttttaaagctggaaatgccgatatacttattggaact
caaatgatagctaaaggattagattttaagaatgtaaccttagttggagttgtagctgca
gatatttctcttaaccttccggattttaggtccggagaaagaacctttcaattacttacg
caggttggtggtagagctggaagaggagaaaaatcagggaaagttattattcagacttat
acccctgaaagctatagcattatagctgcatcaaatcatgattatgaaggattctaccaa
gaggaaattaacttaagaaagactatgaactatccacctttttcaaaggtgtttttaata
aatatatcatcaaaggatgaagctcttttgataaaaatcagccatagtataggtcaagaa
gtaaaggaaaaattaaaggattatgaaaaaatagaaattcttggaccttgcccttgtacc
attgggaaagtaaaagaaaactatagatggcagattatacttaagggagacattgaaaac
aaatttgcaatatcaataaaaaatttatgctatgaaaaaataaaaaatcataaaggtgat
ataaagataagtactgatttaaacccattatcactactttaa
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