Clostridium cellulovorans: Clocel_2802
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Entry
Clocel_2802 CDS
T01294
Name
(GenBank) Peptidase S24/S26A/S26B, conserved region
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb03420
Nucleotide excision repair
ccb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clocel_2802
03430 Mismatch repair
Clocel_2802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccb03400
]
Clocel_2802
Enzymes [BR:
ccb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clocel_2802
DNA repair and recombination proteins [BR:
ccb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clocel_2802
MMR (mismatch excision repair)
Other MMR factors
Clocel_2802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S24
UvrD_C
ADDB_N
AAA_12
AAA_22
GvpD_P-loop
AAA_11
PhoH
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADL52499
UniProt:
D9SS52
LinkDB
All DBs
Position
complement(3425694..3427640)
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AA seq
648 aa
AA seq
DB search
MKRFVTSKPVKLTIIKGPSGTGKTTLAILRLSYLLNNYCQEDKDSAILITRNRLLRGYAR
YIYEGISGNGQLTLFSLLNIEKEILTLEGLKNLIIKKVFSSGYKVIKTKEEEIGFLKKAI
DEIKLKFKKSKLLKDYQYIDFILEEINFINSEGISSLEVYQNVKRYRNIPYPENIKKFVL
RKNSLGREVIYRINEAFNEITKSQGYIKKEAKTNLAISLAIENNIKFTHIIIDDIDKFTR
SELELIKVLASEKQHSTVTLTSRNRKAVLPYSYLGKGRTLKAIDLQGKTILLKDSYRTNK
SICDFAESLMEKGKSRNTLLKSSLVSGIGEYPIHRNFSLEKEEYLYIARLIKEELTRKNK
YKDITILIKEHHYLERLKMFFYSNQIPYVFLDGKEFESNKEAVRISTYDIYSGLENRITI
ICGVNESSYNREEHRRFLYDQILSTKEKLYITSSGKPSIFLDEVSPKLFKIDDRQYSDKG
LEHYTFLDFTRDKRIELIKDITLSKNLSIKSEDSYVDVEESELKRIPVFNNIAAGSPILI
NEEESDGFFLPKAFLKNNKEFFMLKVSGDSMINANLNNEDYVIIERSAQVDNMQIAAVAI
GEEATLKRIKIKGNSVTLISENQNYPPMMVHSKDVRILGNAVGVIKKR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttgtaacaagtaagccagtaaagttgactattataaaaggaccatctgga
acaggaaaaactacattagcaatattgagattatcctaccttcttaacaactattgtcaa
gaagataaagatagtgcaattttaataactagaaacagattgttgagaggatatgcgaga
tatatatatgaaggtatttctggcaatggacagttgacacttttctctcttttaaatata
gagaaggaaatactaacgctagaagggttaaaaaatctgattattaaaaaggtattttcc
tcaggatataaggttattaaaaccaaggaagaagaaataggatttttgaaaaaagcaata
gatgaaataaaacttaagttcaagaaatctaaacttttaaaagactatcaatatatagat
tttattttagaagaaattaattttataaattcagaaggaatatcttccttagaagtttat
cagaatgtaaaaagatatcgtaacattccatatccagagaatattaaaaaatttgttctt
aggaagaattcgctaggtagagaggttatatatagaattaacgaagcgtttaatgagatt
actaaaagccaaggctatattaagaaagaagctaaaacaaatttagctattagtcttgct
atagaaaataatattaaatttactcatataataatagatgatatagataagtttactaga
tcagaactagaattgataaaggttttagctagtgaaaagcaacattcaacagtaacgctt
acatcacgaaatcgaaaagcagtactaccatactcttatttgggaaaaggtagaactctt
aaggctattgatttgcaagggaaaaccattctgttaaaagatagttatagaactaataaa
agtatatgcgattttgcagaaagcttaatggaaaaggggaaaagtagaaatactttactt
aagtcatccttagtaagtggtataggagaatatccgattcataggaattttagtttggaa
aaggaagaatatctatatatagctagattaataaaagaagaattaacaagaaaaaataag
tataaggacataactatattaattaaagaacaccattatttggaaaggttaaaaatgttc
ttttatagtaatcagataccatatgtttttttagatggtaaagaatttgaatcaaacaaa
gaagctgtaagaatatctacttatgatatttatagtggactagaaaatagaattactatt
atttgtggagtaaatgaaagtagctacaatagagaagaacatagaagatttctatatgat
caaatactttcaactaaagagaaactatatatcactagttcaggaaagccttctatattt
ttagatgaggtaagccctaagttatttaaaattgatgatagacaatatagtgataaagga
cttgaacattatactttcttagattttacaagagataaaagaatagaacttataaaggat
attactttatctaagaatttatcaataaaatctgaagattcatatgttgatgtagaagag
tcagagcttaaaaggataccagtgtttaataatatagcagcaggtagtccaatattaata
aatgaagaggaaagtgatggatttttcttacctaaggcttttctaaagaataataaagaa
ttttttatgttaaaagttagcggtgatagtatgataaatgcaaatcttaataatgaagat
tatgtaattatcgaaagaagtgcccaggtagataatatgcagatagctgctgttgctata
ggggaagaagctactcttaaaaggattaaaataaaaggtaatagtgtaactttaatatct
gaaaaccaaaattatccaccaatgatggttcatagtaaggatgtaaggattttaggtaat
gctgtaggagtaataaaaaaaagatag
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