Clostridium cellulovorans: Clocel_2965
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Entry
Clocel_2965 CDS
T01294
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Clocel_2965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccb03019
]
Clocel_2965
03110 Chaperones and folding catalysts [BR:
ccb03110
]
Clocel_2965
03029 Mitochondrial biogenesis [BR:
ccb03029
]
Clocel_2965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccb04147
]
Clocel_2965
Enzymes [BR:
ccb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Clocel_2965
Messenger RNA biogenesis [BR:
ccb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Clocel_2965
Chaperones and folding catalysts [BR:
ccb03110
]
Heat shock proteins
HSP60 / Chaperonin
Clocel_2965
Mitochondrial biogenesis [BR:
ccb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Clocel_2965
Exosome [BR:
ccb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Clocel_2965
Exosomal proteins of other body fluids (saliva and urine)
Clocel_2965
Exosomal proteins of breast cancer cells
Clocel_2965
Exosomal proteins of colorectal cancer cells
Clocel_2965
Exosomal proteins of bladder cancer cells
Clocel_2965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADL52657
UniProt:
D9SSZ5
LinkDB
All DBs
Position
complement(3650957..3652579)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKQILLGEEARRAMQRGVDILADTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAREIE
LEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRQGIR
KAVNATVEELQKISKPINGKEDITRVASISAADEEVGQLIADAMDKVGNEGVITIEESKS
MGTELDVVEGMQFDRGYLSPYMVTDSEKMEALLENPYILITDKKIGSIQEILPILEQIVQ
QGKKLLIVAEDIESEALATLVVNKLRGTFTCVGVKAPGFGDRRKEMLQDIAILTGGQVIS
EELGIELKDAEISMLGSAESVKITKEYTTIVNGKGTKANIDERIHQIKAQIEETTSDFDR
EKLQERLAKLSGGVAVIKVGAATETELKERKLRIEDALAATKAAVEEGIVPGGGTAYINA
MKVVETLKDENNEVQLGINIIRRSLEEPVRQIAANAGLEGSVIIENIKNKETGFGYDALR
EQYVDMIKSGIVDPTKVTRSALQNAASVASSFLTTEGIVADIPEKTPAPPMGGMGMDGMY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaaattttattaggcgaagaagctagaagagctatgcaaagaggggtagat
atcttagctgatacggttaaggttacacttggaccaaaaggaagaaatgtagtattagat
aaaaaatttggatcaccattaataactaatgatggagtttcaatagcaagagaaatagag
ttagaagatccatatgaaaatatgggagctcaactagtaaaggaagttgctacaaagact
aatgatgtagcaggagatggtacaactacagcaacgcttttagctcaagctataatcaga
gaagggcttaaaaacgtaacagcaggggcaaatcctatgttaataagacaaggaatcaga
aaagctgttaatgctactgtagaagaacttcaaaagatttctaaaccaataaacggaaaa
gaagatatcactagagttgcgtctatatctgcagctgatgaagaagtcggacaattaatt
gctgacgctatggataaagtaggtaacgaaggtgttataactatagaagaatcaaaatct
atgggaactgaattagatgtagttgaaggaatgcaatttgatagaggctatttaagtcca
tatatggttacagattcagagaaaatggaagcattacttgagaatccatatattttaatt
acagacaagaaaataggaagtattcaagaaattcttcctatactagaacaaattgttcaa
caaggaaagaaacttcttatcgttgctgaagatattgaaagtgaagctttagctactcta
gttgttaataaactaagaggaactttcacttgtgttggagtaaaagctccaggctttggt
gatagaagaaaagagatgcttcaagatatagctatcttaaccggtggtcaagtaatatct
gaagaattaggcatagaattaaaagatgctgaaatttcaatgcttggtagtgcagaaagt
gttaaaatcactaaagaatacactacaatagttaatggaaaaggtacaaaagcaaacata
gatgaaagaattcaccaaataaaagctcaaatcgaagagactacttcagattttgataga
gaaaaacttcaagaaagattagctaaattatctggtggtgtagctgtaattaaggttgga
gctgcaacagaaactgaacttaaggaaagaaagctaagaatagaagatgctcttgcagct
acaaaagcagctgtagaagaaggtatagtacctggtggtggtacagcttatataaatgca
atgaaggttgttgaaactttaaaagatgaaaacaatgaagttcaacttggtataaatata
ataagaagatctttagaagaaccagtaagacaaattgctgcaaatgcaggtcttgaaggt
tcagtaattatagaaaacattaagaataaagaaactggatttggttatgatgcattgcgt
gaacaatatgtagatatgatcaagagtggaattgtagatccaactaaggttacaagatca
gctcttcaaaatgcagcatctgtagcatcatctttcttaacaacagaaggtatagtagcg
gatattccagaaaaaactccagcacctccaatgggtggaatgggaatggatggaatgtac
taa
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