Clostridium cellulovorans: Clocel_2970
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Entry
Clocel_2970 CDS
T01294
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Clocel_2970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccb03400
]
Clocel_2970
Enzymes [BR:
ccb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Clocel_2970
DNA repair and recombination proteins [BR:
ccb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Clocel_2970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Fe_hydrogense_Fe-S_bd
BLI1
Motif
Other DBs
NCBI-ProteinID:
ADL52662
UniProt:
D9ST00
LinkDB
All DBs
Position
complement(3655903..3656778)
Genome browser
AA seq
291 aa
AA seq
DB search
MDFKNIEIKDDKVIVKDVVNFQLDHVFKCGQCFRWDETESGTYIGVAFGKVIEVEKQEAD
LIIHNTSEEDFNRIWLNYFDLSRNYSDIKAVLSEDPLLNKAVVFGEGIRLLKQDPFEMMI
SFIISANNRIPMIKKEINLISKKWGQKLTYKGKDYYAFPSIEALNSASEEEIEKCGVGFR
AKYIKDTVARINDNNNIDQMISGTDDQCHEMLKEYMGIGPKVADCIMLFSMGKYSAFPVD
VWVKRAMQHFYLAPDVSLKKIRDFGRDKFKELSGFAQQYLFYYARENHILE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggattttaagaatatagaaataaaagatgacaaagtaatagtaaaagatgtagtgaat
tttcaacttgaccacgtatttaaatgtggacaatgctttaggtgggatgaaacagaaagt
ggtacctatattggagtagcttttggaaaagttatagaagttgaaaagcaggaagctgac
ttgataatccacaatacaagtgaagaggattttaatagaatctggttaaattattttgat
ttatctaggaattatagtgatattaaggcagttttatctgaggatccattattaaataaa
gcagtggtttttggggaaggaatcagacttttaaagcaagacccctttgagatgatgata
tcctttattatatctgcaaacaacagaattcctatgataaaaaaagaaattaatttaata
agtaaaaagtgggggcaaaagcttacttataaagggaaggattattatgcatttccttca
atagaggctttgaattctgcatcagaggaagaaatagaaaagtgtggagttggatttaga
gctaaatacattaaagatacagtagctcggattaatgataataataacatagaccagatg
atcagtgggactgatgatcagtgtcatgaaatgcttaaggaatacatgggaataggccct
aaggttgcagattgcataatgctctttagcatgggcaaatattcagcttttccagtggat
gtttgggttaagagagcaatgcaacatttttatttagctccagatgtatctttaaagaag
attagggattttgggcgtgataagtttaaagaactttcaggctttgctcaacagtattta
ttttactatgcaagagaaaatcatatccttgaataa
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