Clostridium cellulovorans: Clocel_3125
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Entry
Clocel_3125 CDS
T01294
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb00300
Lysine biosynthesis
ccb00470
D-Amino acid metabolism
ccb01100
Metabolic pathways
ccb01110
Biosynthesis of secondary metabolites
ccb01120
Microbial metabolism in diverse environments
ccb01230
Biosynthesis of amino acids
Module
ccb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Clocel_3125
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Clocel_3125
Enzymes [BR:
ccb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Clocel_3125
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADL52814
UniProt:
D9STT0
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All DBs
Position
complement(3837613..3839070)
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AA seq
485 aa
AA seq
DB search
MKKGKIVLNFKSHKYDKYIDFTNKNILGYSIDELEQKYGMPLHILFGKKIEENIMEFRNA
LNNNYTNSKICFAVKSSCSIGVLRIINKLGCGVDVSSYNEFKFAEIAEIPYDRMVFNGNC
KTDEIIELAITKDILINVDSVYEFERILEISKNINKKAKVLIRLSGLKVDKATDECIYTS
GEWTKFGINYLEAKELLTNNSVYHQYIDVYGFQVHIGSQIGYYEAYINAIEKIVKLSEEL
AHIGNFMRIINIGGGFPINYVDKVEWEQFQKSMAYKGEENSNCFIWKNEKADYKVNELFY
TDYEKSKMLEKVLNTYINYKDSSKKIKDVLKEIGEPELIIEPGRSIVGDAGITIAKVNGI
KKVNGNNLLVVEMGNVNYAGSVIHNLFNCWDLFKDYSNVDSNEEFSAFICGNLCYNGDMI
SNYKIKFDREPKRGEYVITYDVGGTESHFFASNANMNPIPSRLLINDKNDIEILKSRQTL
EDLMK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagggaaagatagtgttgaacttcaagtcacataagtatgataaatatatagat
tttacaaacaagaatattttaggatatagcatagatgaacttgaacaaaagtatggaatg
ccattacacatattgtttggtaaaaagattgaagaaaatattatggaatttaggaatgcc
ttgaataataattatactaattcaaaaatatgttttgcagttaaaagttcttgttctata
ggtgttttgaggataataaataaactgggctgtggagtagatgtaagctcatataatgag
tttaaatttgcagaaattgcagagataccatatgatagaatggtttttaatggaaattgt
aagacggatgaaattatagaacttgcaataactaaagatattcttattaatgttgatagt
gtatatgagtttgagagaatactagaaatttcaaaaaatattaataaaaaggctaaggta
ttaatacgattatcaggactaaaagtagataaagcaacggatgaatgtatttatacatct
ggagaatggactaaatttggaatcaactatcttgaagcgaaagagttattaactaataac
tccgtatatcatcagtatatagatgtatatggatttcaagtacatattggttctcaaatt
ggttattatgaagcttatatcaatgcgattgaaaaaattgtgaagctatcagaagagtta
gctcatattgggaattttatgaggataataaatattggtggtggattcccaattaattat
gttgataaggtggagtgggagcagtttcaaaagtctatggcatataagggagaggaaaat
tccaattgttttatatggaaaaacgaaaaggcagattataaggttaatgaattattttat
actgactatgagaaaagtaagatgcttgaaaaggttctcaatacttatataaattacaaa
gatagtagcaaaaagataaaagatgtacttaaggaaatcggtgagccagaattaattata
gaaccaggcagaagtatagtaggagatgctggaattacaattgcaaaagtaaatggcata
aaaaaagtaaatggcaataatttattagtcgtggaaatgggaaatgtgaattatgctggg
tctgtaatacataatttatttaactgttgggatttatttaaagattattctaatgtagat
agcaatgaggaatttagtgcttttatttgtggtaacttatgttataacggcgatatgatt
tcaaactacaaaataaaatttgatagagagccaaaaagaggagaatatgtaattacatat
gatgtaggtggaaccgagtcacatttttttgcttctaatgcaaatatgaatcctattcct
tcaagattgcttatcaatgataaaaatgatattgaaatattaaaaagtagacagacttta
gaagatttaatgaaatag
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