Clostridium cellulovorans: Clocel_3597
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Entry
Clocel_3597 CDS
T01294
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03086
RNA polymerase primary sigma factor
Organism
ccb
Clostridium cellulovorans
Pathway
ccb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Clocel_3597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccb03021
]
Clocel_3597
Transcription machinery [BR:
ccb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Clocel_3597
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_1
HTH_NPRL3
Motif
Other DBs
NCBI-ProteinID:
ADL53272
UniProt:
D9SWJ0
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All DBs
Position
complement(4355487..4356770)
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AA seq
427 aa
AA seq
DB search
MSDNLSIIIDYINDNLRFGSKLNIEKVEELFKKYRVSDSEMESVFTELNSLNIEIVHSKG
AFNEKISRLFKYIGPNKELRETKLNKWFETEKIDRDMQKRIRHSLNISGYTIINEVHRDI
NFEDFDFLDEFNFEELDVVLDNDSFNDEVSKLKNVVDKSHNLEYLVDLHSSKEDFRKREQ
ALDNLVNANKKLVWEIALRYKQFSTVSFDNSDMYQAGVLGLMKAAEKFDISKGNQFSTYA
TWWVRQSITRSIADYSTTIRIPVHMREKIIKYVSTENKFWNENGRVASKEELANLLGISS
EEVNYLQVYQDVANLTSLDIPIGADEGSFLGEFIPDDKHRSPEKSAEEGELKRELKEICE
GRLTPKETRILNFRFGFIDGRTHTLEEIGHVENVTRERIRQIEAKAISKLQNPKILERLR
DFYYDRK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacaatttgtccattattattgactatataaacgacaaccttcgatttggtagc
aagttaaatattgaaaaggttgaagaactatttaagaaatatcgagtatcagatagcgag
atggagtcagtgtttactgagctaaattcactgaatattgagattgtacactccaaagga
gcatttaatgaaaaaatcagtaggctttttaagtacattggacccaataaagaattaagg
gaaacaaagctcaataaatggttcgaaactgaaaagattgatcgtgatatgcaaaagcgg
attcgacatagtttaaatatttcaggctatacaattatcaatgaagtacaccgagatatt
aattttgaagattttgattttttggacgagtttaattttgaggaattggatgttgttcta
gacaatgattcattcaatgatgaagtctcaaaactaaaaaacgtagttgataaaagtcac
aatttagagtatctagttgaccttcattctagcaaagaagattttagaaaaagagaacag
gcattagataatcttgttaatgcaaataagaagcttgtatgggaaatagcattaagatat
aaacaattttcaacggtttcttttgataatagtgatatgtatcaagccggtgtgctcggt
ttaatgaaggcagctgaaaaatttgatattagcaagggaaaccaattttctacatatgcg
acttggtgggttagacagagcattactagaagtatcgccgattatagcaccacaatcaga
attccagttcatatgagagaaaaaataatcaaatatgtaagtactgaaaacaaattttgg
aatgagaatgggcgagtagctagtaaggaagaactagctaatttactgggtatttcttcg
gaagaagttaactatttacaagtatatcaggatgttgcaaacctaacgagtctggatatt
ccaattggcgctgatgaagggagctttcttggagagttcattccggatgataaacatcga
tcaccagagaagtctgcagaagaaggagagttaaagagagagcttaaagagatttgtgaa
ggacgattaactccaaaagaaactagaattttaaattttcgatttggttttattgatgga
agaacccatactctcgaagaaataggacatgttgagaatgtaactcgtgaacgtataagg
caaattgaagccaaagcaatcagtaaacttcaaaatcctaagattttagaaaggttaaga
gatttttattatgatagaaaatag
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