Clostridium cellulovorans: Clocel_3699
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Entry
Clocel_3699 CDS
T01294
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccb
Clostridium cellulovorans
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccb03016
]
Clocel_3699
Enzymes [BR:
ccb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Clocel_3699
Transfer RNA biogenesis [BR:
ccb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Clocel_3699
Prokaryotic type
Clocel_3699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF6616
Motif
Other DBs
NCBI-ProteinID:
ADL53369
UniProt:
D9SX66
LinkDB
All DBs
Position
complement(4483558..4484292)
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AA seq
244 aa
AA seq
DB search
MRNIKLILEYDGTKYSGWQKQKNSVTVQGTIEKAIEAITKESVELIGCSRTDSGVHAKGY
TANFFTNSKIPIERFYIAINAKLPEDIVILSSEEVPEDFHSRFNCIGKTYCYSVLNRVSY
PAMYRNYLYHVPRKLSIDEMKKAAESFVGTYDFNAFRNLGTEVASTVRTIHRIEVEEHGD
IINILVTGDGFLYNMVRIIAGTLVEVGLGQKRSDQIKVILESKDRNRAGKTAPARGLSLD
KVYY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaatattaaattaattttagaatatgatggtacaaaatattctggatggcaaaag
cagaaaaatagtgtcacagtacaaggaacaatagagaaagctatagaggctataaccaaa
gagtctgtagagcttattggatgtagtcgaactgattcaggagttcatgcaaaggggtat
actgcgaacttttttactaatagcaaaattcctattgaaaggttttatatcgctattaat
gcaaaattaccagaagatattgttattttatcctctgaggaagtaccggaagattttcat
tcaaggtttaattgtattggtaagacttattgttacagcgttttaaacagagtaagttat
ccagcaatgtataggaattacttatatcatgttcctaggaagttatctatagatgaaatg
aaaaaggctgcagagagttttgttgggacctatgattttaatgcttttagaaacctaggc
acggaagtagcatcgacagtaagaactattcacaggattgaagttgaagagcatggagat
ataataaatattttagtaacaggtgatggttttttatataatatggttagaattatagct
ggaacattagtagaagttggtttagggcaaaagaggtcagatcaaataaaagtgatatta
gagtctaaggatagaaatagagcaggaaaaacagcacctgctagaggattaagtctcgat
aaggtatactattaa
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integrated database retrieval system
