Clostridium cellulovorans: Clocel_3704
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Entry
Clocel_3704 CDS
T01294
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Clocel_3704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccb03021
]
Clocel_3704
03400 DNA repair and recombination proteins [BR:
ccb03400
]
Clocel_3704
Enzymes [BR:
ccb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Clocel_3704
Transcription machinery [BR:
ccb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Clocel_3704
DNA repair and recombination proteins [BR:
ccb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Clocel_3704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ADL53374
UniProt:
D9SX71
LinkDB
All DBs
Position
complement(4487207..4488154)
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVESTEDGSYGKFVIEPLERGYGITLGNSLRRILLSSLPGVAANSIKIDG
VLHEFSTVKGVKEDVTELILNVKPLALKMNGEGPKTIYIDAQGPAVVTAADIITDDSVEV
ISKDLHIATLDEDGRLQMEIEVNSGRGYVTQNKNKRDDMPIGTIAIDSIYTPITRVNFTV
ENTRVGQITDYDKLTLEVWTNGTIRPEEAISLSSKILIEHLKLFMTLTDNADNVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERSMDDMMKVRNLGKKSLEEVD
QKLTALGLGLKLNDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagagatagaaaagcccaaaatagaatgtgtggaatccactgaagatggttcttat
ggcaaatttgttatagaacctcttgaaagaggatatggtattactttaggaaattcttta
agaagaatattactatcttctcttccaggtgttgcagcaaattctattaaaatagatgga
gtacttcatgagttctcaacagttaaaggtgttaaagaagatgttactgagcttatactc
aatgtaaaacctcttgcattaaaaatgaatggagaaggaccaaaaactatatatatcgat
gctcaaggcccagctgtagttactgcagcagacattatcacagatgatagtgttgaggtt
ataagcaaagatttgcatatagctactttagatgaagatggaagactccaaatggagata
gaagttaatagtggaagagggtatgttactcagaataaaaataagagagacgacatgcca
attggtacaatagctattgattctatttacactccaataactagagttaattttactgtt
gaaaatacaagagtaggtcaaattactgactatgataaactaactttagaagtatggaca
aatggaaccataagaccagaagaagctattagtctttcttcaaaaattcttatcgaacac
ttaaaactattcatgacattaactgataatgcagataatgttgaaataatggttgaaaaa
gaagaagataagaaagaaaaagttttagaaatgacaatagaagagcttgatttatcagtt
agaagctataactgcttaaagagagcaggaataaacacagttcaagaactaactgaaaga
agcatggatgacatgatgaaggttagaaatcttggtaagaagtctttagaagaagttgac
caaaagcttacagccctaggcttagggttaaagcttaacgatgagtaa
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