Entry |
|
Name |
(GenBank) DNA-directed RNA polymerase, alpha subunit
|
KO |
|
Organism |
ccb Clostridium cellulovorans
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ccb00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Clocel_3704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ccb03021]
Clocel_3704
03400 DNA repair and recombination proteins [BR:ccb03400]
Clocel_3704
Enzymes [BR:ccb01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Clocel_3704
Transcription machinery [BR:ccb03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Clocel_3704
DNA repair and recombination proteins [BR:ccb03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Clocel_3704
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(4487207..4488154)
|
AA seq |
315 aa
MLEIEKPKIECVESTEDGSYGKFVIEPLERGYGITLGNSLRRILLSSLPGVAANSIKIDG
VLHEFSTVKGVKEDVTELILNVKPLALKMNGEGPKTIYIDAQGPAVVTAADIITDDSVEV
ISKDLHIATLDEDGRLQMEIEVNSGRGYVTQNKNKRDDMPIGTIAIDSIYTPITRVNFTV
ENTRVGQITDYDKLTLEVWTNGTIRPEEAISLSSKILIEHLKLFMTLTDNADNVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERSMDDMMKVRNLGKKSLEEVD
QKLTALGLGLKLNDE |
NT seq |
948 nt +upstreamnt +downstreamnt
atgttagagatagaaaagcccaaaatagaatgtgtggaatccactgaagatggttcttat
ggcaaatttgttatagaacctcttgaaagaggatatggtattactttaggaaattcttta
agaagaatattactatcttctcttccaggtgttgcagcaaattctattaaaatagatgga
gtacttcatgagttctcaacagttaaaggtgttaaagaagatgttactgagcttatactc
aatgtaaaacctcttgcattaaaaatgaatggagaaggaccaaaaactatatatatcgat
gctcaaggcccagctgtagttactgcagcagacattatcacagatgatagtgttgaggtt
ataagcaaagatttgcatatagctactttagatgaagatggaagactccaaatggagata
gaagttaatagtggaagagggtatgttactcagaataaaaataagagagacgacatgcca
attggtacaatagctattgattctatttacactccaataactagagttaattttactgtt
gaaaatacaagagtaggtcaaattactgactatgataaactaactttagaagtatggaca
aatggaaccataagaccagaagaagctattagtctttcttcaaaaattcttatcgaacac
ttaaaactattcatgacattaactgataatgcagataatgttgaaataatggttgaaaaa
gaagaagataagaaagaaaaagttttagaaatgacaatagaagagcttgatttatcagtt
agaagctataactgcttaaagagagcaggaataaacacagttcaagaactaactgaaaga
agcatggatgacatgatgaaggttagaaatcttggtaagaagtctttagaagaagttgac
caaaagcttacagccctaggcttagggttaaagcttaacgatgagtaa |