Clostridium cellulovorans: Clocel_4083
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Entry
Clocel_4083 CDS
T01294
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb00052
Galactose metabolism
ccb00511
Other glycan degradation
ccb00600
Sphingolipid metabolism
ccb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Clocel_4083
09103 Lipid metabolism
00600 Sphingolipid metabolism
Clocel_4083
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Clocel_4083
Enzymes [BR:
ccb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Clocel_4083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
BetaGal_ABD2
PTEN2_C2
Motif
Other DBs
NCBI-ProteinID:
ADL53745
UniProt:
D9SM89
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All DBs
Position
4927209..4930247
Genome browser
AA seq
1012 aa
AA seq
DB search
MKDISPTLDWLENPEIFRVNRIDAHSDHWFYERMDDIKLQDEMPLKQNLNGKWRFSYSEN
PSLRLTDFYKEDFDVSGFDYIEVPGHIQLQGYDKCQYINTMYPWEGHDELRPPHISKSYN
PVGSYVTFFNIKEELKNKQTFISFQGVETAFYLWLNGKFVGYSEDTFTPSEFDITEYLKE
GENKLAVEVYKRSSASWIEDQDFWRFSGIFRDVYLYAVPYTHINDLFVKTDLSDDFKAGT
LNATVKISGNIEGRLEAYLEDSKGNKVTETLTQDISSASSNGELNLSLKIDRVNLWSAEE
PTLYTLYLLIHTKDNVLTEIVPQKVGFRRFEMKDKIMCLNGKRIVFKGINRHEFSARRGR
SITKEDMLWDINFLKQHNINAVRTSHYPNQSLWYRLCDEYGIYLIDEANLESHGSWQKMG
QCEPSWNVPGNLPEWQDVILDRASSMVERDKNHPSILIWSCGNESYAGEDIFQMSEYFRK
KDPSRLVHYEGVFWNREYDKTSDMESRMYAKAADIEKYLNNDPKKPYISCEYMHAMGNSC
GGMMKYTELEDRYSMYQGGFIWDYGDQALYRKTLDGKEVLSYGGDFTDRPTDYNFCGNGI
VYANRVPSPKAMEVKYLYQNIKITPDKNGAIIKNQNLFVNTDKYELYYKVEKEGKLLLEG
KTKVSIAAGEEKHVELPFGEYNCPEEIVFTVSMHLAEDTIWANKGHEIAFGQKVFERKEI
TKTSPDSKLKIVYGDVNIGVHGKDFKVIFSKQYGGIISLRYSNKEFITRTPMPFFWRAIT
DNDRGNRHDFRCAQWLSATYGLKCVDGSIEPHDDKIILNYIYQLPITPTTTVTMSYEVSS
DSTIKVTVAYKGVEGLPELPVLGMNFKLLSEFNTFSWYGMGPDENYIDRCEGAKLGIYES
TPLNNLSKYLVPQECGNRTGTRWVMVKNQKGEGLKFAYEKSPFEFSVLPYSNMELENALH
QEDLPPVNFTHVNIIGKQMGIGGDDSWGAPVLPEFCIDSSKDLEFSFIISNI
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatattagcccaaccttagactggttagagaatccagaaatctttagagtaaat
agaatagatgctcattcagaccattggttttatgaaagaatggatgatattaaattacaa
gatgaaatgccacttaaacaaaacttgaatgggaaatggagattttcttacagtgaaaat
ccatccttaaggttaacggatttttataaagaagactttgatgtaagtggctttgactat
attgaagttccaggacatattcaacttcaaggttatgataagtgccaatacattaacaca
atgtatccttgggaaggtcacgatgagctaagaccacctcatatttcaaaaagctataat
ccagtaggaagttacgtaacattttttaatataaaagaagaacttaaaaataaacaaacc
tttatatcattccaaggtgttgaaactgcattttatttatggcttaatggcaaattcgta
ggctacagtgaagatacctttactccttcagaatttgatattacagaatatctaaaggaa
ggagaaaacaaacttgctgtagaggtgtataaaagaagtagtgccagttggattgaagac
caagatttttggagattctcaggaatttttagagatgtctatttatatgcagttccttac
acccatataaatgaccttttcgtgaaaactgacttaagtgatgactttaaggccggaacc
cttaacgcaactgttaaaatttctggtaacatagaaggcagactagaggcatacttagaa
gattcaaagggaaacaaggttacagagactttaactcaagatataagtagtgccagctct
aatggagaattaaacctatcacttaaaattgatagggtaaacttatggagtgcagaagaa
ccaaccttatatactctttatcttttaattcacactaaggataatgtattaactgagatt
gtcccacaaaaagttggctttagacgctttgaaatgaaagataaaatcatgtgccttaac
ggaaaaagaatagtattcaaaggtataaaccgccatgaatttagtgcaagacgtggccgt
tcaattactaaggaagatatgctttgggatattaactttttaaaacagcacaatatcaac
gctgtaagaacttctcactatccaaaccaaagcttatggtatagactttgtgatgaatat
ggtatctatttaatagatgaagcgaacctagaaagtcatggttcatggcagaagatgggc
caatgcgaaccatcttggaatgttccaggaaatcttcctgagtggcaggatgtaatttta
gaccgtgcttcttcaatggttgaacgtgataaaaaccatccttctattcttatttggtct
tgcggaaacgaatcttatgcaggagaagatatattccaaatgtcagaatactttaggaaa
aaagatccttctcgtttagtccattatgaaggagtattctggaacagagaatatgataaa
accagtgacatggaaagtagaatgtatgctaaagcagcagacatagaaaaatacttaaat
aatgatccaaaaaaaccttatattagttgtgaatatatgcatgctatggggaactcctgt
ggtggaatgatgaaatacactgaacttgaagatagatattcaatgtaccaaggcggattc
atctgggattacggcgatcaggctctttatagaaaaacactagatggcaaagaagtatta
tcttatggtggcgattttactgaccgtccaacagattataatttctgtggcaatggtata
gtatacgcaaatagagtaccttcacctaaagcaatggaagtaaaatacttatatcaaaac
ataaaaatcactccagataagaatggtgcaataattaagaaccaaaacctttttgtaaat
acagataaatatgaattatattataaggttgaaaaagaaggtaaattacttctagaagga
aaaacaaaagtatctatagctgctggagaagaaaagcatgtagaactaccttttggagaa
tataattgccctgaagaaatagtctttaccgtttcaatgcacttagcagaagacacaatt
tgggcaaataaaggacacgaaatagcatttggacaaaaggtttttgaaagaaaagaaata
acaaagacttctcctgatagcaagcttaaaattgtttatggagatgtaaatataggtgtt
cacggaaaagactttaaagtaatattctctaaacaatatggcggaattatctctttgaga
tactcaaataaggaattcataacaagaactccaatgccattcttctggagagcaattaca
gacaatgatagaggaaatagacacgactttagatgtgctcaatggcttagtgctacctat
ggtctaaaatgtgtagatggctcaatagaaccgcatgatgataaaatcatcctaaattac
atctaccaattaccaataactccaacaactactgttacaatgtcttatgaggtatcatca
gatagtacaattaaagtaactgtagcttataaaggagtagaaggactacctgaacttcca
gtattaggtatgaactttaaacttttatcagaattcaacaccttctcatggtatggaatg
ggtccagacgaaaactatatcgatagatgtgaaggtgctaagttaggcatttatgaaagt
actccattaaataacctatctaaatatctcgttccacaagaatgtggtaatagaacaggt
actagatgggtaatggttaaaaaccaaaaaggtgaaggtcttaagtttgcttacgaaaaa
tcaccatttgaatttagtgttttaccttactctaacatggaacttgaaaatgctcttcac
caagaagatttaccaccagtcaacttcactcacgttaacattataggtaaacaaatgggc
attggtggagatgatagctggggagcaccagttttacccgaattctgtatagactctagt
aaagatttagaatttagctttataatttctaatatataa
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