Campylobacter coli CVM N29710: G157_01600
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Entry
G157_01600 CDS
T02838
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ccc
Campylobacter coli CVM N29710
Brite
KEGG Orthology (KO) [BR:
ccc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccc03016
]
G157_01600 (truD)
Enzymes [BR:
ccc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
G157_01600 (truD)
Transfer RNA biogenesis [BR:
ccc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G157_01600 (truD)
Prokaryotic type
G157_01600 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGV09450
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All DBs
Position
322648..323766
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AA seq
372 aa
AA seq
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MNLEEENTIFKPLYSLKHSPINAYFSKNSDDFVVRERPLYEFSGKGEHLILHINKKDLST
NEALRILSELSGVKMRDFGYAGLKDKQGSTFQYLSMPKKFESFLANFSHPKLKILETFIH
ENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALINLDKQGFANYFGYQRFGKFGDNYKEG
LEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELSYFANDFTEKELAQIYSISKEEA
KELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAELERFKARDISAMGLLIGAKAYEASQ
GLALNLENEIFKDALEFKAKMQGSRRFMWSYLEDVKWRYDEQKAHFCMEFFLQKGSYATV
VLEEILHKNLFE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaggaagagaacaccatttttaagcctttgtatagtttaaaacacagtcct
attaatgcgtattttagtaaaaatagcgatgattttgtagtgcgtgaaaggcctttgtat
gaatttagtggcaagggcgaacatcttatcttgcatatcaataaaaaagatttaagcact
aatgaagctttaagaattttaagcgaattaagcggggttaagatgcgtgattttggctat
gctggacttaaagacaagcaaggctctacttttcaatatctttctatgcctaaaaaattc
gagagttttttggctaatttttctcatcctaagcttaaaattttagaaacttttattcac
gaaaataaattaagaataggccatttaaaaggaaattctttttttatacgcttaaaaaaa
gttttacctagtgatgctttaaaattagagcaggctttgataaatttagataaacagggg
tttgcaaattattttggttatcaacgctttggaaaatttggggacaattacaaagaaggg
cttgaaattttacgtggtaaaaagatgaaaaatgtcaaaatgaaggagtttttaatctct
gcttttcaaagcgagctttttaatcgttatttgagtaaaagagtggaattatcgtatttt
gcaaatgattttaccgaaaaagaattggcacaaatttatagcatctccaaagaagaagct
aaagaacttaaaaaacaagagcagttttttaagcttttaaaaggcgaggttttggggcat
tatccttttggaaaatgctttttatgcgaggatttaagtgctgaacttgaacgttttaag
gcaagagatatcagtgctatgggacttttaatcggtgctaaagcttatgaggctagtcaa
ggactggctttaaatttggaaaatgaaatttttaaagacgctttggaatttaaagctaaa
atgcaaggctcaagacgctttatgtggtcgtatttagaagatgttaaatggcgttatgat
gagcaaaaagcccatttttgcatggagtttttcttgcaaaaaggctcttatgctaccgtg
gttttagaagagattttacataaaaatttgtttgaatga
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