Campylobacter coli CVM N29710: G157_03135
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Entry
G157_03135 CDS
T02838
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ccc
Campylobacter coli CVM N29710
Pathway
ccc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G157_03135 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccc03021
]
G157_03135 (rho)
03019 Messenger RNA biogenesis [BR:
ccc03019
]
G157_03135 (rho)
Transcription machinery [BR:
ccc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G157_03135 (rho)
Messenger RNA biogenesis [BR:
ccc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G157_03135 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Spore_III_AA
Mor
ATPase_2
AAA
OB_RNB
OB_RNR_1st
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGV09741
LinkDB
All DBs
Position
complement(627013..628311)
Genome browser
AA seq
432 aa
AA seq
DB search
MEKEKKQHQRTHIPVEGYKIEDLKLLDLENLVKIANECEIENPREFRRQELIFEILKAQT
KKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQIRKFALRVGDIVTGQVRE
PKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTEKIKLEYDAMKLTGRILDLFT
PIGKGQRGLIVAPPRTGKTELMKELASAIAKNHPEMHLIVLLVDERPEEVTDMQRCVKGE
VFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVIILLDSITRLARAYNTATPSSGKVLS
GGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFKGTGNSEIVLD
RNISDRRIYPAINIIKSGTRKEELLQGVAELQKIWAIRSAISQMDDIEALKFLYSKMLKT
KDNVELLSIMNE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaaaaaacaacatcaaagaacccacattccagtggagggttataaaatt
gaagacttaaaactacttgacttagaaaacctagttaaaatagctaatgaatgcgagata
gaaaatcctagagaatttcgccgtcaagaactcatttttgaaattttaaaagcccaaacc
aaaaagggtggttttatcctttttacaggaattttagaaatttcttcagaaggttatggc
tttttaaggggtatggattcaaatttaagcgatagtgtcaatgatgcttatgtttcaaac
tcacaaattcgtaaatttgctctacgcgtgggcgatatagtaactggacaagttagagag
cctaaggatcaggaaaaatactatgctcttttgaaaatagaagcgattaattatttgcct
ttgcaagaagctaaagaaagacctttatttgataacttaactcctatttttccaacagaa
aaaatcaaactcgaatacgatgctatgaaattaactggaagaattttagatctttttacc
cctataggtaaaggacaacgcggactcatcgtagcaccgccaagaacgggtaaaacagaa
cttatgaaagagctagcaagtgcgattgctaaaaatcatcctgaaatgcatttaatcgtt
cttttagtcgatgaaagacctgaagaggttactgatatgcaaagatgtgtaaagggtgaa
gtgtttagctctacttttgatttgcctgcttataatcatgttcgcgtggcagaactagtt
atcgaaaaagcaaaaagaatggtagaaacaggcaaagatgttatcattttgctagatagt
atcacaaggcttgctagagcttataacactgcaactccaagcagtggaaaggtactaagt
ggtggggtagatgctaatgcacttcataaacctaaacgcttttttggtgcagcaagaaat
atagaaaatggcggatctttgaccatagtagcaactgcacttatcgacacaggttcaaga
atggatgatgtgatctttgaagaatttaaaggaacgggtaatagcgaaatagtcttagat
agaaatatttcagatagaagaatttatcctgcgattaatatcatcaaatctggaactcga
aaagaagaacttttacaaggagtggcagaactacaaaaaatttgggctattcgttcagcg
atttctcaaatggatgatatcgaagcgcttaaatttctttattcaaaaatgttaaaaact
aaagacaatgtagaacttttatctattatgaatgagtag
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