Ruminiclostridium cellulolyticum: Ccel_0052
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Entry
Ccel_0052 CDS
T00835
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cce
Ruminiclostridium cellulolyticum
Brite
KEGG Orthology (KO) [BR:
cce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cce03400
]
Ccel_0052
DNA repair and recombination proteins [BR:
cce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ccel_0052
Archaeal homologous recombinant proteins
Ccel_0052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_27
AAA_21
AAA_29
Gp44_lid
ABC_tran
nSTAND_NTPase5
DUF899
Motif
Other DBs
NCBI-ProteinID:
ACL74440
UniProt:
B8I3W3
LinkDB
All DBs
Position
57092..60241
Genome browser
AA seq
1049 aa
AA seq
DB search
MKPLKLTISAFGPYAGKQFIDFTTLTEQIFVISGPTGAGKTTIFDAISFALFGEASGSSR
DRDSLRSDFAEPDTETFVELEFELKGKIYKIRRMPQQQQRKLRGEGYTLRNADAELLMPN
GTLITKIVNVDERINQLLGIDKSQFKQIVMLPQGEFRKLLESDSSDREVIFRKIFGTEDF
AEIQKRIDDDRASLEKSVHDLKTQINTHISHFDVGEDQTLVDMRNSKNINLEQFIYSVER
LLQKDKSIIDEIKAELTETIKAQGMLKEEITKCTEVNRKLSDREQTKQQYEALLSKGNEY
SQKEKNLEYARKALPISEVDEQCRKVKQTLEVKAGELELARQELEKRTCEFKSIAESLNT
YKDLEPENKKNETELALLEKMLPKVIEYEKGLKHLNAARAEYTQLTGEFERIQRELETNK
IKESQQAETLKLIYTTEAECISLEKQISENRKLLIELDGIRKLMGICQEEQNSLENKRAE
FASFEKNFCDFRSRLEVMEDNYIRGQAGILAGTLKENTPCPVCGAYDHPKPAEMPSSIPS
QEQIRDSKAEFSKLTELRTEKSKAISELNGSVESKYKEIIIRLKALDDIIKIDNYAELVG
SGRFETVLGQINATGTGLKEKTVELKAQYNSKKEFTGKKDAYEKEQTQIRDKVKIQEESV
QKMTAQKTGILESITKFQTEAQVIEKEISEDIRSASKLKARIEEQKTKIADFQKEYNQLK
KLHESSREAVSNAEKEVAVRVSSVDESREEITRQERLLKEKLASSKFGDYEQFLRMKKTQ
QEIDILQQEITMYYRSLNSLKDLYRHLEEETKGLEKQDILLLNTRYAELEQRQQVLQEQH
NLVFSRYNNNSRTIKQLTGTMEKLKQLECKYGIIAKLAKVAKGDNPQRITFERYVLAAYF
DEIIIAANYRLTRMTGSRYLLKRKEEKGKGRAQQGLELEVFDNYTGKARHVKTLSGGEGF
KASLALALGLADVVQSYSGGISLDTLFVDEGFGSLDPESLDGAIECLTEIQKTGRLVGVI
SHVTEIKERINSVLEVISSKEGSFIKFNI
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgttaaaacttacaatcagtgcctttgggccgtatgcaggaaaacagtttatt
gattttactacccttactgagcaaatattcgtaatatcaggccctacaggtgcaggtaaa
actaccatttttgacgcaatcagctttgctctttttggagaagcctccggaagcagccgg
gatagggacagccttagaagtgattttgcagaaccggacacggaaacatttgttgagttg
gaatttgaattaaaaggcaaaatatataaaataaggagaatgccccaacagcagcaaagg
aagctaaggggagagggttatacattaagaaatgccgatgcggagcttttgatgccgaat
ggaacgcttattacaaaaattgtaaatgtagatgaaagaataaatcagcttcttggtatt
gataaatcacaattcaagcaaattgtaatgcttccccagggcgagttcagaaagctgctg
gaatctgacagcagtgatagggaagttatattcagaaagatatttggaacagaggatttt
gccgaaattcagaaaaggatagatgatgacagggcaagcttagaaaagtctgttcatgat
ttgaaaacacaaataaatacccacataagtcattttgatgtaggtgaagaccaaacattg
gttgacatgaggaatagcaaaaatataaatctggagcaatttatttattctgttgaacgg
ctgctgcaaaaggataaatctataatagatgaaattaaggcggagttaactgaaacgata
aaagcacagggaatgctcaaggaagagattacaaaatgcacagaggtaaacagaaagctt
tcagacagggaacaaacaaaacaacagtatgaggctcttttgtcaaagggtaacgaatac
agtcaaaaggaaaaaaacctcgaatatgcaagaaaagccctgcccataagtgaagttgac
gagcagtgcagaaaagtaaagcagacgttggaagtaaaagccggcgaattggaactggca
aggcaggagcttgagaaaaggacttgtgagtttaaaagtatagcggaaagcttaaatacc
tataaagatttggagccggagaacaaaaagaatgagaccgagcttgcattattagagaaa
atgcttccaaaggttatcgaatatgagaaggggttaaaacatttaaatgctgcccgagca
gaatacactcaattgacaggagaatttgagaggattcagagggagcttgagacaaataaa
ataaaggaaagtcaacaggcggaaactctaaaactgatttatactaccgaggctgaatgt
ataagccttgagaagcaaatatcagaaaacagaaagctgcttatagagcttgatggaatc
agaaagttgatggggatatgtcaggaagaacaaaacagtcttgaaaacaagagagcggaa
tttgcttcctttgaaaagaacttttgcgatttcaggagcaggcttgaagtgatggaggat
aattatatacgggggcaggcaggaattcttgccggaacattgaaagagaatactccctgt
cctgtttgcggagcctatgaccatccaaagcccgcagaaatgccttctagtattccttct
caagagcagataagggatagcaaagcagagttttcaaaattaacggaacttaggacggaa
aagtcaaaggctatttctgaattaaacggaagtgtagaaagcaaatacaaagagataatt
atcagactcaaagcacttgatgatattataaaaatagacaattatgcggaattggtggga
agtggacgttttgaaacggtattggggcaaataaacgcaacgggaaccggacttaaggag
aaaaccgttgaattgaaggctcagtacaattcaaaaaaagagtttacaggcaaaaaggac
gcatacgaaaaggaacaaacacaaatccgtgataaggttaaaatacaggaagaatctgtt
cagaagatgactgcacaaaaaacgggaatattagagagtattacaaaattccaaacggaa
gcacaagttattgagaaggagatctcagaagatatacgctccgcatcaaagttaaaagcg
agaattgaggagcaaaagacaaaaatagctgattttcagaaagaatacaaccaactcaaa
aaacttcacgaatcctcaagggaagctgtgagcaatgcagagaaggaagtggcagtgaga
gtatcctcagtagatgaaagtcgagaggaaatcacaagacaagaaaggcttttaaaggaa
aagcttgcgagttctaaatttggggactatgagcaatttttgagaatgaaaaaaacccag
caggaaattgatattctccagcaagagataactatgtattaccgaagcttaaattcactc
aaggatttgtatcggcacctggaggaggaaacaaaggggcttgaaaaacaggatattttg
ctactaaacacccgttatgcagagcttgagcaaaggcagcaggtgcttcaggaacagcat
aatttagtgttctccagatataacaataactcaagaacaataaagcagctgactggtacc
atggaaaaattaaaacagctggagtgcaaatacggtataattgcgaagctggctaaagtt
gcaaaaggagataatcctcagaggataacctttgagagatatgtgctggcagcttacttt
gacgagattataattgccgcaaactacaggttaaccagaatgaccggctcaagatacctt
ttaaagcgaaaagaggaaaaaggcaagggtagagcccagcagggactggaattagaggtt
ttcgacaactatacgggaaaggcccgtcatgtaaaaaccctttcgggaggagagggtttt
aaggcttcactcgctttggctcttggtctggctgacgtggtacagtcctattccggggga
ataagccttgataccttgtttgtggatgagggttttgggtcccttgacccggaatccctt
gacggtgctatagaatgcctaactgaaatccaaaaaacaggtcgtttggtaggagtaata
tcacatgtaactgaaataaaagagagaataaattcagtattagaagtaatctcaagcaaa
gaaggaagctttataaaatttaatatatag
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