Ruminiclostridium cellulolyticum: Ccel_0065
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Entry
Ccel_0065 CDS
T00835
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cce
Ruminiclostridium cellulolyticum
Brite
KEGG Orthology (KO) [BR:
cce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cce03400
]
Ccel_0065
DNA repair and recombination proteins [BR:
cce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ccel_0065
Archaeal homologous recombinant proteins
Ccel_0065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_29
B129_C2H2-zf
AAA_13
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACL74453
UniProt:
B8I499
LinkDB
All DBs
Position
70967..73924
Genome browser
AA seq
985 aa
AA seq
DB search
MYKLSKIELDNFRVFKGHKTIEFLNRTGSPYNFICIYGSNGSGKTALVDAFEWLATGKLH
RIDSDMQVQGKSYEGAILTHIEAYDNDQRANVVAHFIDSNRDTLQYKRNIRIRRDSINDY
LSGNCTGSGLSAKQILPYSRVAGFVSAEKPEQRFTSWAGFINPEDQSFSLLTNTYRLRSK
IKSALEKTERELGEVTTALVNCNLDAGLVSVLNSDILSYNELYTEILSEEKPIEPLHQND
LGIYQIPDLSSIKAIQLRVSGELERFRSREPIFRQLIDNYPVYHKAEDDLVNIYKVEKIY
QERIKKIHQKKEFDTLSRNVGSLYDALTHLLKECTDDINEQIKVSMAQKDKLEKERKTWR
QQLEQIEKDTVDLKKYDPNPIYLNAVEQQKVLQNGLASLAQISLYIESHKFEDASTLTTT
LSQEFRNEVLEKIHELTLQNDLIQSTIKQRTQISLQIRESESSCNEVIASIEKIRAQITS
EQLNACPICKTEFSTTESLLARIEQEFCSKDLAEARAEYNTKDLQLRNFRESYKSMVQSW
NIIKQNTSKVLEVKLTDLNKEIEEISVKVEHFNRSIFLLEEQRQLLIAQLNSIIDFTGEL
TLDVFDLLIKNTYQRLHESHVQKESMLSQICILSERLHAVMLCLPGETKDAQKQLEISLH
LLPIQSERINTLKVSTQEYISKVDQLVSMHETLLDFCEVNSDELQTCNTKVSDLVQQQST
LKLIINDYQNLVFKAHLDQQTAIEQVKQQFFNEQNIKDILETKISVSLINILSHETELLN
YQNQYKKLIKQKNELNKKVEVVKRAFEKTDNLYNSMCSIQQGVVDQAFAGEMVNEIYRLL
EPNKDFPRLSFKIDFNSTERPELYINAHERDMSNSIVLPELIFSTAQLNTISLCIFLSNA
LSNSRLDSQTLILDDPISSFDDINTVAFSDLLRILCVQNDWQIIFTTHDEKLFRLLQVKL
SPEYHNSLFLQFKDKGQLVDIRHLI
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtataagttgagcaaaatagagctagacaattttagagtatttaagggacataagact
attgagttcttaaatagaacaggtagtccatataacttcatttgcatttatggttccaat
ggctctgggaaaacagcccttgtggatgccttcgagtggcttgcaactgggaaattacac
cgaattgatagtgatatgcaggtacagggaaaaagctatgagggagctattttaacacac
attgaggcttatgataatgaccaacgggccaacgtagttgctcatttcatagattccaat
cgtgataccttgcaatataaacggaatatccggataagaagagatagcatcaacgattac
ctcagtggcaattgtactggaagtggattatctgccaagcaaatacttccatatagtagg
gtagccggctttgttagcgcggaaaagcctgagcagcgttttactagttgggcagggttt
atcaatccagaagaccagagtttttccctgttgacgaatacctatcgcttaaggtcaaaa
attaaatccgcattggaaaaaacagagagagaattaggggaagtaacaaccgctctggtt
aattgtaatctagatgccggacttgtttcggtattaaatagtgatattttatcgtataac
gagttatatactgaaattctgtctgaagagaaaccgattgagccacttcatcaaaacgat
ttaggaatctatcaaattcctgacttgagtagtataaaagcaattcaactgcgtgtttca
ggcgaactggagcgtttccgttctagagagcctatttttagacagcttattgataactat
ccagtatatcataaagcggaggatgatctagtaaatatctataaagtagaaaaaatttat
caggaaagaatcaaaaaaatccatcaaaaaaaggaatttgacaccttgtcacgaaatgta
ggttctctttatgatgccctgactcacctgcttaaagaatgcaccgacgacattaacgaa
cagatcaaagtaagtatggctcagaaagacaagttagaaaaagaacgaaagacctggcga
caacagcttgagcaaattgagaaggatactgtggatttaaagaaatatgatccaaatccg
atttatctgaatgcagttgaacagcaaaaagtgctgcaaaacggtttggcaagcttagcg
cagataagtctttacatcgaatctcacaaatttgaagatgcatctacacttactactacg
ctttctcaagaatttcgtaatgaagttcttgagaaaattcatgaattaactttacagaat
gatttaattcaaagtaccattaaacagcgtacacagatatccctgcaaattcgagaatca
gaatcatcatgtaacgaagtaattgcatcaattgaaaagatccgtgctcaaatcacaagt
gagcaacttaacgcttgtccaatatgtaaaactgaattttcaactacagaatcgttgctc
gcacgtattgagcaggagttttgcagcaaggatttggctgaagcacgcgcggagtacaat
accaaagatttgcaactgagaaattttcgcgaatcctataaaagtatggtgcaatcctgg
aacataatcaaacaaaatactagcaaagttttggaggtaaaactaaccgatttaaacaaa
gaaattgaagaaatttctgttaaggttgagcattttaatcgtagtatttttcttcttgaa
gagcaacgacagctgctcatagcacagttaaattctataatagattttacaggcgaactt
actcttgatgttttcgacttactgataaagaatacatatcaacggttgcacgaatctcat
gtccaaaaagagtctatgctatcccaaatttgtatattatctgagagactgcatgctgtt
atgctatgtttacctggggagactaaggatgcacaaaagcaacttgaaatatcattacat
cttttgccgatacaatcggaaagaatcaatactctgaaagtatccactcaagagtatata
tctaaagttgatcaacttgtatctatgcatgagacgttgttagacttttgcgaagtaaat
tcagatgaactacagacttgcaatactaaggtaagtgatcttgtgcagcaacaatcgacc
ttgaaattaattataaatgattaccaaaatcttgtttttaaggctcatcttgatcaacag
actgctatagagcaagtgaagcaacaattttttaacgaacaaaatataaaagatatttta
gaaacaaaaatttcagtatcacttattaatattttaagccatgaaacagagttgctcaac
tatcaaaatcaatataaaaaactaattaagcaaaaaaatgaactaaataaaaaagtagaa
gttgtaaagagagcattcgaaaaaactgacaacctctacaattcgatgtgttctatacaa
cagggggtggtagatcaggcttttgctggtgaaatggtcaatgaaatttatcgtttgcta
gagccgaacaaggacttcccgcgtcttagtttcaaaatcgactttaatagtacagaacgt
ccagagctatatatcaatgctcatgagagagatatgagtaactcaattgtgcttccagag
ctaattttcagtacagctcagctaaacactatttcactatgcatttttctcagcaatgca
ttgtcaaattcacggcttgattcacaaaccctgatattggatgatcctattagtagcttt
gatgatataaacactgttgcattttctgatttactacgaatcctttgtgtacaaaatgat
tggcagatcatatttacaactcatgatgaaaagttatttcgattattgcaggttaaatta
tcgcctgagtatcacaactctttattcctgcaatttaaagacaaaggacaactagtagac
atacgacatctcatataa
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