Ruminiclostridium cellulolyticum: Ccel_0660
Help
Entry
Ccel_0660 CDS
T00835
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cce
Ruminiclostridium cellulolyticum
Pathway
cce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ccel_0660
09124 Replication and repair
03420 Nucleotide excision repair
Ccel_0660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cce03021
]
Ccel_0660
03400 DNA repair and recombination proteins [BR:
cce03400
]
Ccel_0660
Enzymes [BR:
cce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Ccel_0660
Transcription machinery [BR:
cce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Ccel_0660
DNA repair and recombination proteins [BR:
cce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Ccel_0660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
PDDEXK_1
PhoH
Motif
Other DBs
NCBI-ProteinID:
ACL75040
UniProt:
B8I7B6
LinkDB
All DBs
Position
762748..765120
Genome browser
AA seq
790 aa
AA seq
DB search
MGKPEIKISIRNLVELVLRSGDIDNRLVSSGRMLEGTKIHQKIQKQGGELYNKEVSLAHN
YETQDFIFRLEGRADGIISEPGGVVIDEIKSTARPLELIDEEFSILHWAQAKCYAFIYAL
QNELQNIYVQLTYFHIDTEETKNIRKLFSIKELNEFIEDLLDKYVVWASISDSWNKQRDD
SIKSLQFPFKSYRRGQRELAVAVYKTIMQGKKLFAQAPTGIGKTISTLFPAVKALGEQHI
SKIFYLTAKTITRQVAEEAFSKMRECGLVFRTITLTAKDKICFNKGGSCNPDFCEYAKGH
YNRVNNAMEDVLNTSQNLSREVIEEYALKHKVCPFEFSLDLSLWADCIVCDYNYAFDPRV
YLKRFFLNNTGDYAFLVDEAHNLVDRAREMFSAQIHKSAYLEAKKLMKSKVPKVAKILNK
INSYMVTLRKQCAEEGFIISKTELKDLYRLLNNFISESEEWILKNQNNNIEGFEQLLEVY
FDSIAFTRMADFYDERYVTFIETKSMDVRVKLFCLDPSYLLSDAVKRGKTAVFFSATLTP
VNYFMDILGGDKEDYNINLASPFDKDNLCLIVNDNISTRYKSRDKSYDKIVDIIWSSISK
RTGNYVVFFPSYKYMNEVYTRFTEQYPETNTIIQETSMTEEERESFLNRFQSGTEKSLVS
FGVLGGIFSEGIDLKGDRLIGAIIVGVGLPQVSPEQNIIMDYFKNKNRMGFENAYMYPGM
NKVLQAAGRVIRSEHDVGTVILLDERFSNGNYRRLFPKHWEHVLRVQDTGQLEKRLEQFW
IDKDMDKVNT
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacccgagataaaaatttcaatcagaaaccttgttgaactggtactgaggtct
ggtgatattgataacaggcttgtttcctcgggtagaatgttggaaggtacaaaaatacac
cagaagatacaaaagcaaggtggagaattatataacaaagaggtttctcttgcccataat
tacgagacccaggatttcatattcagacttgaaggccgtgcagacggtattatatcagaa
ccgggcggtgttgtaatagatgaaataaaatcaacagcacgtccccttgaattaatagat
gaagaattcagtattttgcattgggcacaagccaagtgctatgcttttatttatgcactc
cagaatgagcttcaaaatatatatgtacaattgacgtattttcacatagatacggaagaa
actaaaaatatcagaaaactgttttcaattaaagaactgaatgagtttattgaagactta
ttggataaatatgtggtatgggccagtatttcggattcatggaataaacaaagagacgat
tccataaaaagccttcagtttccgtttaagtcatacagaaggggccagcgtgagcttgca
gttgcagtatataaaactataatgcaaggcaaaaaattgtttgctcaggctcctacaggt
attggaaaaaccatatcaacgctttttcctgctgttaaagccctaggtgaacaacacatc
tcaaaaatattttatctaacagcaaaaaccattacaaggcaggtagctgaagaagcattt
tcaaaaatgagagagtgtggtttggtattcagaacaattactcttactgcaaaggataaa
atatgctttaataagggcggcagctgtaatccggatttctgtgaatatgcaaaaggccat
tacaacagggtgaacaacgcaatggaagatgtgctaaacacttcccaaaacctgtctcgg
gaagtaatagaagaatatgcactcaaacataaggtttgtccatttgaattcagccttgat
ttgtcattgtgggcggattgtattgtttgtgactacaattatgcatttgacccgagagta
tatctaaaaagattttttctcaataatacgggggattatgcttttttggttgatgaggct
cacaatttggtagacagagcacgggaaatgttttctgctcaaatccataagtcagcatat
cttgaggcaaaaaagcttatgaagtcaaaagtccctaaggttgccaagatattgaacaaa
ataaattcatatatggtgactcttcgcaaacaatgtgcagaagaaggctttattatcagc
aaaacagagcttaaagatctttacaggctgctaaacaactttatatccgaatcagaggaa
tggatattaaaaaatcaaaataacaacattgagggttttgaacagcttctggaggtttat
ttcgactcaatagcatttaccagaatggctgatttttatgatgaaagatacgttacattt
atagagacgaagtcaatggatgtccgagtaaagcttttctgtctggacccctcgtatttg
ctttctgatgcggtaaagagagggaaaacagctgtgtttttctctgcaacgcttactcct
gttaattattttatggatatacttggcggggacaaagaggattacaacattaaccttgct
tcgccatttgacaaggacaatctttgtcttatcgttaatgataatatctctacaagatat
aaaagccgtgataaaagttatgataaaatagtagacataatatggtcttctataagcaaa
aggacaggaaattatgtagtgttttttccctcatataaatatatgaacgaggtttataca
agatttacagagcaatatcctgaaacgaatacaataatacaggaaacttccatgacagaa
gaagaaagggagagctttctaaacaggtttcaatctggtactgaaaagagccttgtttcc
ttcggtgtgttgggaggaatattttccgagggtatagatttaaagggagaccggcttata
ggagctataatagtaggggtaggacttcctcaggttagtcctgaacaaaatataatcatg
gattattttaaaaacaaaaaccgtatgggttttgagaatgcatatatgtatccgggtatg
aacaaagtattacaggcggcaggaagggtaatccgttcagaacacgatgtgggaacagta
atacttcttgatgaaagattttcaaatggaaactacaggaggctatttccgaaacactgg
gaacatgtcctgcgtgtacaggatacgggacagttggaaaaaagattggagcagttctgg
atagataaagatatggacaaggtgaatacatga
DBGET
integrated database retrieval system
