Ruminiclostridium cellulolyticum: Ccel_1050
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Entry
Ccel_1050 CDS
T00835
Name
(GenBank) conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cce
Ruminiclostridium cellulolyticum
Pathway
cce03420
Nucleotide excision repair
cce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ccel_1050
03430 Mismatch repair
Ccel_1050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cce03400
]
Ccel_1050
Enzymes [BR:
cce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ccel_1050
DNA repair and recombination proteins [BR:
cce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ccel_1050
MMR (mismatch excision repair)
Other MMR factors
Ccel_1050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
UvrD-helicase
Viral_helicase1
AAA_19
DEAD
SLFN-g3_helicase
ADDB_N
ResIII
Stereocilin
nSTAND3
NACHT
AAA_30
zf-C2H2_aberr
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACL75410
UniProt:
B8I9F0
LinkDB
All DBs
Position
complement(1304447..1306555)
Genome browser
AA seq
702 aa
AA seq
DB search
MNGKQIQEKPLNRIEDNADDSSIFNNFPEEIEHLEEIKEKLNDALKNYSKSVKQYDEQYM
NSKRYLADYRSEIDPKEIFQNEISMKQIERAGTLAVKMRERINKLIESPYFARIDFSEDE
SELPSVFYIGRFSFSDADQSNILIFDWRTPVSSMFYDCELGQAGYDAPIGRVNGNLTRKR
QLKIAQGQMKYVLESSINIQDDVLQRELSHTSDEKMKTIISTIQREQNQIIRNEQAETLI
IQGVAGSGKTSIALHRIAYLLYRFKETLSAQNVVILSPNKVFADYISNVLPELGEEPIFE
MSFADVAEIQLDGIIKFEPDKDPLETNDPAWAERVKFKSGFDFVKMMDQYLEYAAAEYFE
PTDYEFAHFKADREWILSRYNAYKNYPVKKRLFEVSSDIYDKFQTENLMGDELPKPKAVL
KKLGDMFKIKNTLALYKDFYKTIKLPEKFVMPDKKLLEWADVYPFMYFHSAFEGLKENQL
IKHVIIDEMQDYTPAQYIVINKLFKCKKTILGDFGQSLNPNHLHSLDDLKKVYEGVNYVE
LNKSYRSTYEIINFAKLIQNVAKLEPIERHGDVPELILCNDTQDELIKIKDKIEAFQQSG
NVTLGIILKTNSMAASLYDTLSKDYDIQLITPDSLQFVNGITVTSIQMSKGLEFDEVIIP
SANSETYCTDYDRKLLYIACTRAMHKLSLLYTGSLTELIENK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtaaacaaatacaagaaaaacctttaaaccgcatagaagacaatgcggatgat
tcaagcatatttaacaattttcctgaggaaatcgaacatcttgaggaaattaaagaaaaa
ttgaatgatgctttaaaaaactatagtaaatcagtcaaacagtatgatgagcagtatatg
aattctaaacgatatcttgcagattatcgcagtgaaatagacccaaaggaaatattccaa
aatgagatctctatgaaacagattgaaagagcaggaactcttgctgtaaaaatgagggaa
agaattaacaagctgatagaatctccatactttgcaaggatcgactttagtgaagatgaa
agcgagctcccctctgttttctacatcggcagattttccttttctgatgcagatcagtca
aatattctgatttttgactggcggactcctgtctcaagcatgttttatgattgtgaattg
ggtcaagcaggatatgatgctccaattggaagagttaatgggaatctgacccgtaaacgt
caattaaaaatagcccaggggcaaatgaaatatgttttagaaagctcaataaacattcag
gatgatgtactgcaaagggagctaagccatacatcagatgaaaaaatgaagacaataatc
tctaccatacaaagagaacagaatcagattatcagaaatgagcaagcagaaactcttatt
atccagggagttgccggttctggtaaaacgtccatcgcactacaccgaatagcgtattta
ctgtatcggttcaaggaaaccttgtctgctcaaaatgtagttatactatccccaaataag
gttttcgcagactacatttccaatgtattgcctgaactaggtgaagaaccaatcttcgaa
atgagttttgctgatgttgccgaaatacaattggatggaataattaaatttgagcctgac
aaagaccctctcgaaacaaatgatcctgcttgggcagaaagagtaaaatttaaatctgga
tttgactttgtaaaaatgatggatcaatatctggaatatgcagcagctgaatatttcgaa
cccactgattatgaatttgctcattttaaagctgacagggaatggattctgtcacggtac
aatgcatataaaaactatcctgtcaagaaacggttgtttgaggtatcgtcagatatttac
gataaattccaaactgaaaatcttatgggagatgaattgccaaagccaaaagcagttcta
aagaaattaggtgatatgtttaagattaaaaacaccttagctctttataaagacttttat
aagacaataaaattacctgagaaattcgtaatgcctgataagaaattactggagtgggcc
gatgtttatccttttatgtactttcattctgcctttgagggtttaaaggaaaaccaacta
ataaagcatgttatcattgatgaaatgcaggattacacacctgctcaatatattgttata
aataagctctttaaatgcaaaaaaacaatacttggggattttgggcagtctcttaatccc
aatcaccttcattccctcgatgatctcaaaaaagtttacgaaggtgtcaattacgtggaa
ctgaataagagctaccgttcaacatacgaaattattaattttgcaaagctgatacaaaat
gttgcaaagttggaaccgatagaacgtcacggagatgtacccgaacttatattgtgcaat
gacacacaggatgagcttataaaaataaaagataaaattgaagcttttcagcaaagcggc
aatgtaacactgggaattatcctgaaaacaaatagcatggcagcttcgctatacgatact
ttatccaaggattacgatatccagttaattacacctgacagccttcagtttgttaatgga
attacagttacctctatccaaatgtcaaaaggacttgaatttgatgaggtaatcatccct
tccgcaaacagcgaaacctattgtactgattatgaccgtaaacttttgtatattgcctgt
actcgtgccatgcacaagttatcacttctatataccggaagtttaaccgaattaatagaa
aataaataa
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