Ruminiclostridium cellulolyticum: Ccel_1398
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Entry
Ccel_1398 CDS
T00835
Name
(GenBank) DNA gyrase subunit B domain protein
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cce
Ruminiclostridium cellulolyticum
Brite
KEGG Orthology (KO) [BR:
cce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cce03032
]
Ccel_1398
03400 DNA repair and recombination proteins [BR:
cce03400
]
Ccel_1398
Enzymes [BR:
cce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Ccel_1398
DNA replication proteins [BR:
cce03032
]
Prokaryotic type
DNA Topoisomerases
Ccel_1398
DNA repair and recombination proteins [BR:
cce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ccel_1398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
Mod_r
Motif
Other DBs
NCBI-ProteinID:
ACL75752
UniProt:
B8I1F4
LinkDB
All DBs
Position
1697815..1699797
Genome browser
AA seq
660 aa
AA seq
DB search
MTKKDRKNEYGNESISSLKGADRVRLRPGVIFGSDGLDGCEHSFFEILSNSIDEAREGHG
NIIEITRFADNSIMVQDWGRGLPVDYNSKEERFNWELVYCELYAGGKYQNNSGENYEYSL
GLNGLGACATQYSSEYFDVTVFRDGYRYDLHFEKGENIGGLKKEKCKYDRTSTIQKWRPD
IDVFTDIDIPLEYYQTVLKKQAVVNAGLKFILKDEESGETYIYMYENGIVDYIKEITKDT
GFTEVQFYEGSARGRDRADKPEYKVKMQIAFCFNNHTNLLEYYHNSSFLEYGGAPDKAVK
NAMIYEIDKSIKARGKYNKDESKITFADIEDSLILVVNSFSTITSYENQTKKSITNKFIQ
ETMTDFLKQQLEIYFIENKIESDKIIEQILVNKRSRETAEKTRINIKKKLSGNLDISNRV
KKFVDCRTKDISRREIYIVEGDSALGACKLGRDAEFQAIMPVRGKILNCLKAQYDNIFKN
EIIIDLLKVLGCGVEIKSKHNKDLNTFDLANLRWDKVIICTDADVDGFQIRTLILTMLYR
LVPTLLSVGKVFIAESPLFEITCKNKSYFAYTEKEKAEILAKLEGKKYTIQRSKGLGENE
PEMMWETTMNPATRRLIKVMPSDVEKTTMMFDVLLGDNLAGRKQFIEDNGNKYLDMIDVS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaagatagaaagaatgaatatggtaatgaaagcatttcatcactcaaaggg
gctgatcgggtaagactacgcccaggtgttatattcggttcagatggtctggacggttgc
gaacattctttctttgaaattttgtcaaactcaatagatgaggccagggaaggtcatggg
aatattattgagattacaaggtttgcggacaattccattatggttcaggactggggaaga
ggtttgcctgtagattataactcaaaagaggaacgtttcaactgggagcttgtttattgt
gaattgtacgcaggagggaagtatcagaacaattcaggtgaaaactacgaatatagtctt
ggactaaacggacttggggcatgtgcaacccagtatagctcggaatattttgatgttact
gtatttcgtgacggatacagatacgaccttcactttgaaaagggtgaaaatatcggaggg
ttgaaaaaggaaaaatgtaaatatgatagaacgtcaaccattcagaaatggagacctgat
atagatgtttttaccgatatagatattccactggaatattatcagacggtactgaaaaaa
caggcagtagtcaatgcggggcttaaattcatactaaaggatgaggagtctggtgaaaca
tatatatatatgtatgaaaacggtatagttgactatatcaaagaaataacaaaggatacc
ggtttcactgaagtacagttttacgagggttctgcgaggggcagggacagagcggacaag
ccggaatacaaggttaagatgcagatagccttctgttttaacaatcatacaaaccttttg
gaatactatcataactccagcttccttgagtatggcggtgcccctgacaaggctgtaaaa
aatgcaatgatatatgagatcgacaagagtataaaggcaaggggaaaatataacaaagac
gagtcaaaaataacctttgccgatatcgaggacagtcttatactggttgttaactctttt
tccacaataaccagctatgagaaccagacgaaaaaatcaataaccaacaagtttattcag
gagaccatgacagatttccttaaacaacagctggaaatctatttcatagaaaacaaaatt
gaaagcgacaaaataattgagcaaattctggtaaataaaagaagcagggaaaccgccgaa
aagaccagaatcaacattaaaaagaagcttagcggcaatttggatatttccaacagggta
aagaagtttgtcgactgccgtacgaaggatatatcaagaagagagatatatatagttgag
ggtgattctgctcttggagcctgtaagctcggaagggatgcagaatttcaggctattatg
ccggtaaggggaaaaatcctcaattgtcttaaagcacagtatgacaatatttttaaaaat
gaaattattattgatcttttaaaggtactgggatgtggtgtagaaatcaaatcaaagcat
aacaaggacttaaatacttttgacctggcgaaccttaggtgggacaaggtaattatatgc
actgatgcggacgtagacggcttccagatcagaactctgatactaactatgctttataga
cttgtccctacacttttgagtgtaggaaaagtatttatagcagagtcgcctttgtttgag
attacttgcaaaaataagtcctactttgcatatacggaaaaggaaaaagcagagattcta
gcaaagcttgaaggcaagaagtatactattcagcgttcaaagggacttggagaaaacgag
ccggaaatgatgtgggagactactatgaatcctgccacaaggcggctgataaaggtaatg
ccaagcgatgtagagaaaactactatgatgtttgatgtactgctgggagataatctggca
ggaagaaaacagtttatagaagataatgggaataaatatcttgatatgattgatgttagt
taa
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