Ruminiclostridium cellulolyticum: Ccel_1707
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Entry
Ccel_1707 CDS
T00835
Name
(GenBank) 3' exoribonuclease
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cce
Ruminiclostridium cellulolyticum
Pathway
cce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ccel_1707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cce03019
]
Ccel_1707
03016 Transfer RNA biogenesis [BR:
cce03016
]
Ccel_1707
Enzymes [BR:
cce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Ccel_1707
Messenger RNA biogenesis [BR:
cce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Ccel_1707
Transfer RNA biogenesis [BR:
cce03016
]
Prokaryotic type
tRNA degradation factors
Ccel_1707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
MIP-T3_C
F10E9_4_C
Motif
Other DBs
NCBI-ProteinID:
ACL76058
UniProt:
B8I2R5
LinkDB
All DBs
Position
complement(2051987..2054098)
Genome browser
AA seq
703 aa
AA seq
DB search
MFKSFSMELAGRTLTVETGKLAQLANGSALIRYGDTVIMSSATASAAPRDGIDFFPLSVD
YEERLYAVGKIPGGFIKREGKPSEKAILTSRVIDRPIRPLFPKDLRNDVAVVNTVMSVEQ
DNSPEIAAMIGASVAISISDIPFNGPIGGVVLGLVDGEVIINPNEEQRAKSKMYVTLAGT
KEKITMIEAGADIVPDDVMFDAIKKGHEEIKKICDFINGIVKEVGKAKFTYESADVPADL
FEVVKEFAYDKMRIAVLATDKQDRDAKVSQLTEETQAALAEQFPEMESKINDALYKLEKK
VVREYILKEGKRIDGRRLDEIRTLSAEVGILPRTHGSGLFERGQTQVLTTVTLGAMGDVQ
MLDGIDTEETKRYMHHYNFPGYSVGEAKTSRGPGRREIGHGALAERSLVPVIPTETEFPY
AFRLVSEVLMSNGSTSQGSVCGSTLALMDAGVPIKAPVAGISAGLVIDEENPDNFVTFMD
IQGIEDFFGDMDFKVAGTTEGITAIQMDIKVDGLSYEIIRQAFELTRMGRLQIINDVILK
AIPQPRKELSEYAPKIITTNIDPEKIRDVIGPGGKMINKIIAETGVKIDIEEDGRVYILT
PDSAAAQKALKIIQGIAKDIEPGEVYLGKVVRITTFGAFVEILPGKDGLVHISKLDKKRV
EKVEDVVSIGDEILVKVTEIDKQGRINLSRKDAMAEENTTEEK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatcatttagtatggaacttgcaggcagaacacttacagttgaaacaggtaag
cttgcacaattggccaacgggtcagcattaataaggtatggagatactgtaataatgtca
tcggcaaccgcttcggctgctcccagggatgggattgattttttcccgcttagtgtagat
tacgaagaaagattgtatgcagtaggaaagattcccggaggatttatcaagagagaggga
aagccttctgaaaaagcaatattgacttcaagagttatagacagaccaatcagacctctt
ttccctaaggacttgagaaacgatgtagctgttgtaaatacagtaatgtcggtagaacag
gataattcacctgaaatagctgcaatgataggagcatccgttgcaataagtatatccgat
attccatttaatgggccaatcggtggagttgtgcttggtttagttgacggtgaagtaatt
ataaatccaaatgaagaacagcgtgcaaaaagtaaaatgtacgttacccttgccggaacc
aaggaaaagataacaatgattgaggcaggagctgacatagttcctgacgatgttatgttt
gatgccattaagaagggtcatgaagagataaagaagatttgtgactttataaatggaata
gtaaaagaggttggtaaggcaaaatttacttatgaatcagctgatgttcctgcggaccta
ttcgaagttgtaaaagaatttgcatacgataaaatgcgtattgcagttctggcaacggac
aagcaggacagagatgccaaggtttcacaattgacagaagaaacccaggctgccttggct
gaacagttccctgaaatggaaagtaaaataaatgatgctttgtacaagcttgaaaagaag
gtagttcgtgaatatatattgaaggaaggcaaacgtattgacggcagacgtttggatgaa
ataagaacactttctgctgaagtaggcatacttccaagaacacatggttccggacttttt
gagagaggacagacacaggtgcttactacagtaacattaggtgcaatgggtgatgttcaa
atgctggatggtattgacaccgaagaaacaaagagatatatgcaccactacaacttcccg
ggttatagtgtcggcgaagcaaagacctcaagaggtcctggaagaagagaaatcggacac
ggtgcgttggctgaaaggtctcttgtaccggttattcctacagaaactgaatttccgtat
gcattcaggcttgtatcagaagtattgatgtcaaacggttcaacctcacagggtagcgta
tgcggtagtactttagcactcatggatgccggggttcctatcaaggcacctgtagcaggt
atatcagcaggactggttattgacgaagaaaacccggacaattttgttaccttcatggat
atccagggtatcgaagactttttcggcgatatggacttcaaggttgcaggaactacagaa
ggtattactgctatccagatggatataaaggttgatggtctcagctacgagattatacgt
caggcatttgaattgaccagaatgggccgtttacagattatcaacgatgtaatattaaag
gcaatacctcagcccaggaaagagctttctgagtatgctcctaaaataataacaacgaat
atagatcctgaaaaaatccgtgatgttattggtccgggcggaaagatgattaataagata
attgctgaaacgggtgtaaagatagatattgaagaagacggaagagtttatatattaaca
cctgatagtgcagccgcacagaaggcattgaaaataattcagggaatagcaaaggatatc
gagccgggtgaggtataccttggtaaggtcgtaagaataacaactttcggtgcttttgtt
gaaatattaccgggtaaagacggcttggttcatatttcaaagctcgataagaagagagtt
gaaaaagttgaagatgttgttagtataggtgatgaaattcttgtaaaagttactgagata
gataagcagggaagaatcaatttgtcaagaaaagatgccatggcagaggaaaatactact
gaagaaaaataa
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