Ruminiclostridium cellulolyticum: Ccel_2056
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Entry
Ccel_2056 CDS
T00835
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cce
Ruminiclostridium cellulolyticum
Brite
KEGG Orthology (KO) [BR:
cce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cce03032
]
Ccel_2056
03400 DNA repair and recombination proteins [BR:
cce03400
]
Ccel_2056
Enzymes [BR:
cce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Ccel_2056
DNA replication proteins [BR:
cce03032
]
Prokaryotic type
DNA Topoisomerases
Ccel_2056
DNA repair and recombination proteins [BR:
cce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ccel_2056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
DUF7078
BEX
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ACL76402
UniProt:
B8I3Q9
LinkDB
All DBs
Position
complement(2413347..2415467)
Genome browser
AA seq
706 aa
AA seq
DB search
MADNLVIVESPGKVKSISKFLGKGYKVEASVGHVRDLPKSQMGVDIDNDFEPKYITIRGK
GDVISKLKKEAKAAKKVFLATDPDREGEAISWHLAKILNIDEKQKCRVSFNEITQNAVKN
AIKQPRTIDMGLVDAQQARRVLDRIVGYKISPLLWKKVRKGLSAGRVQSVATKMICDRED
EIEKFESQEYWSIIAKLVKPKASPNFGAKFYGIGKEKLELTNEEQVNSILEEINKSQYIV
QKVKEQEKKRAAAAPFITSTLQQEASRKLGYTTKRTMMVAQQLYEGIEIKGRGSVGLITY
MRTDSTRISTDAQNEAREYIKTKYGQDYIPEKPREYKNKSASQDAHEAIRPTYIDLPHEQ
IKEYLSPEQYKLYRLIWDRFISSQMSSAIYDTVSADITAGKYLFKANGSKVKFPGFMVLY
TEGNDNEGKDEAEQDEKENKLPQLNEGDILELKENTPKQHFTQPPARYTEATLVRALEEK
GIGRPSTYAPTITTILSRGYVLKEKKLLVPTELGKIVNDIMKNHFENIVDTKFTAEMESE
LDSVEDGDKEWKAVMRDFYSSFAGVLKKAEESIGDVELPVEVSDVQCDKCGRYMVVKHGR
FGKFLACPGFPECRNAKPIVEEAGVECPICKGKVLIKKTKKGRKYIGCEKNPECPFMSWD
MPSPNKEVCSVCGSFMLQKFSGKKKVLKCSNDKCTSNIEASKDNTK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacctggttattgtggagtctcctggaaaagttaaatctataagcaaattt
ttaggtaagggatataaagtagaggcttctgtcggacatgttagggatttgcctaaaagc
cagatgggcgttgatatcgataatgattttgaacctaagtatattactataagaggtaag
ggagatgttatatcaaagctgaaaaaagaagccaaggcagctaaaaaagtgtttctcgca
actgaccctgaccgtgaaggtgaggcgatatcctggcacttggccaaaatattaaatatt
gatgaaaagcagaaatgcagggtttcttttaatgaaataacacaaaatgctgtaaagaat
gctataaaacagccgagaacaatagatatgggccttgttgatgcacaacaggcaagaaga
gtactggacagaatagtgggctataagataagccctctgctttggaagaaagtaagaaaa
ggcttgagtgcgggaagagtacaatctgtagctacaaaaatgatttgtgacagggaagat
gaaattgaaaaatttgagtcacaagaatattggtctataattgcaaagcttgtcaaacca
aaagcaagtcctaactttggggcgaaattctacggtattggtaaggaaaaattagaatta
actaatgaggaacaggttaattcgattttagaagaaataaataaaagccaatatatcgta
caaaaggttaaagagcaggaaaagaaaagggctgcagcggcaccttttattacaagtaca
ctacagcaggaagcttccagaaaacttggatatacaacaaaaagaaccatgatggttgca
cagcagctttatgaaggcattgaaataaagggccgtggatcggttggtcttataacctat
atgagaacggactcaacaagaatatcaacagatgcacagaatgaggccagagagtatatt
aaaacaaaatacggacaggattatattcctgaaaaaccaagagaatataaaaacaaatct
gcttcacaggatgcacatgaagcaatacgcccaacatatatagatttaccacatgagcaa
ataaaggaatacctcagtccggaacaatacaagctatacaggcttatttgggacagattt
atttccagtcagatgtcatccgctatatacgatactgtgtcagctgatataactgcggga
aaatacctgttcaaggcaaacggttcgaaagtaaaatttccgggttttatggtactgtat
actgaaggaaatgataatgaaggcaaggatgaagcggagcaggacgaaaaggaaaacaaa
ctacctcagctgaatgaaggtgatattcttgaactcaaagaaaatacacctaagcagcat
tttacgcaacctcctgccagatacaccgaggcaacgcttgtaagagccttggaggaaaag
ggtataggaagacctagtacctacgctcctacgattactactattttatccaggggctac
gtactaaaggagaagaagcttttagtaccgacagagctcggaaaaatagtaaacgacata
atgaagaatcattttgagaacattgttgatactaagtttacagctgaaatggaaagcgaa
ctggattccgtagaggatggtgacaaagaatggaaggccgttatgagggatttttattct
tcatttgccggagtacttaaaaaagccgaagaatccataggtgatgtagaattacctgta
gaggtatcagatgttcaatgtgataaatgcggcagatacatggttgttaaacatgggaga
tttggtaaattccttgcctgcccgggatttcccgagtgtagaaatgcaaagccgattgta
gaagaggctggagttgaatgtcctatttgtaagggaaaggtacttattaaaaagactaaa
aagggtagaaagtatattggttgtgagaaaaaccctgaatgtccctttatgagttgggat
atgcctagccccaataaggaagtctgttctgtttgcggatcatttatgcttcaaaaattc
tccggcaaaaagaaggttcttaagtgcagcaacgataagtgtacaagtaatatagaagcc
tcaaaagataataccaaataa
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