Ruminiclostridium cellulolyticum: Ccel_2870
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Entry
Ccel_2870 CDS
T00835
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
cce
Ruminiclostridium cellulolyticum
Pathway
cce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ccel_2870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cce03400
]
Ccel_2870
Enzymes [BR:
cce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
Ccel_2870
DNA repair and recombination proteins [BR:
cce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ccel_2870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACL77164
UniProt:
B8I864
LinkDB
All DBs
Position
complement(3420955..3421506)
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AA seq
183 aa
AA seq
DB search
MDNIYNEKPLPDILATGLKVVFIGYNPGLLSARNRHHYSHKSNRFWRFLYESGLTPSRFE
PEDDRKILEFGYGSTNIVDRPSKAANEIGTDEVVEGSANIYRLLDNFKPRIACYVGIGVY
RAYASSILRVPASGINVKPGLQSASILESISDFVCYSTSGLNTVPFAEQRKCFENLKKLL
DSI
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggataatatttataatgaaaagccgttgccggacattcttgcaacgggacttaaagtt
gtttttataggttataatccgggcttgctttctgccagaaacaggcaccactattctcat
aaaagcaacagattctggaggtttttgtatgaatcgggtctgacaccttccagattcgag
cctgaggatgacaggaaaatacttgagtttggatatggctccacaaatattgttgacaga
ccgtctaaagctgccaacgaaattggcactgatgaagttgttgaaggttcggcaaacatt
tacaggcttttggataattttaaacctcgaattgcctgctatgtgggaataggagtgtac
cgtgcatatgcttctagtattttgagggtacctgcatctggaattaatgttaagcctgga
cttcaatccgcaagtatactggaatctatatcggattttgtttgctacagtacaagcggg
ctgaatacagttccttttgccgaacaacgcaagtgttttgaaaatttgaaaaaattattg
gactctatctga
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